Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 AC239809.2-201ENST00000415381 517 ntBASIC17.5■□□□□ 0.39
LRRC58Q96CX6 AC004951.3-201ENST00000418645 1148 ntBASIC17.5■□□□□ 0.39
LRRC58Q96CX6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 AP003097.1-201ENST00000530657 1135 ntBASIC17.5■□□□□ 0.39
LRRC58Q96CX6 CKBP1-201ENST00000565489 1086 ntBASIC17.5■□□□□ 0.39
LRRC58Q96CX6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC58Q96CX6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.49■□□□□ 0.39
LRRC58Q96CX6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 AC108860.2-201ENST00000562760 2183 ntBASIC17.49■□□□□ 0.39
LRRC58Q96CX6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC58Q96CX6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 AC006116.8-202ENST00000587620 1550 ntBASIC17.48■□□□□ 0.39
LRRC58Q96CX6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC58Q96CX6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC58Q96CX6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC58Q96CX6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms