Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RNF25Q96BH1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF25Q96BH1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF25Q96BH1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF25Q96BH1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF25Q96BH1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF25Q96BH1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF25Q96BH1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF25Q96BH1 MCCD1P1-208ENST00000445732 328 ntBASIC19.34■□□□□ 0.69
RNF25Q96BH1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF25Q96BH1 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF25Q96BH1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF25Q96BH1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF25Q96BH1 AL390728.6-201ENST00000566446 1246 ntBASIC19.34■□□□□ 0.69
RNF25Q96BH1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF25Q96BH1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF25Q96BH1 AC099343.3-201ENST00000605834 2503 ntBASIC19.34■□□□□ 0.69
RNF25Q96BH1 AL162741.1-201ENST00000565563 1558 ntBASIC19.34■□□□□ 0.69
RNF25Q96BH1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF25Q96BH1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF25Q96BH1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF25Q96BH1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF25Q96BH1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RNF25Q96BH1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF25Q96BH1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
RNF25Q96BH1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF25Q96BH1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF25Q96BH1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF25Q96BH1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF25Q96BH1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF25Q96BH1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RNF25Q96BH1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.33■□□□□ 0.69
RNF25Q96BH1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
RNF25Q96BH1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RNF25Q96BH1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
RNF25Q96BH1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF25Q96BH1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RNF25Q96BH1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF25Q96BH1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF25Q96BH1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
RNF25Q96BH1 MIR564-202ENST00000385049 94 ntBASIC19.33■□□□□ 0.68
RNF25Q96BH1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF25Q96BH1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF25Q96BH1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF25Q96BH1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF25Q96BH1 AP001542.1-201ENST00000591314 200 ntBASIC19.33■□□□□ 0.68
RNF25Q96BH1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF25Q96BH1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF25Q96BH1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF25Q96BH1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF25Q96BH1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF25Q96BH1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF25Q96BH1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF25Q96BH1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF25Q96BH1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RNF25Q96BH1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RNF25Q96BH1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF25Q96BH1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF25Q96BH1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RNF25Q96BH1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF25Q96BH1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF25Q96BH1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF25Q96BH1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF25Q96BH1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RNF25Q96BH1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
RNF25Q96BH1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF25Q96BH1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF25Q96BH1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF25Q96BH1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RNF25Q96BH1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF25Q96BH1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.32■□□□□ 0.68
RNF25Q96BH1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF25Q96BH1 AP003071.4-201ENST00000562276 1284 ntBASIC19.32■□□□□ 0.68
RNF25Q96BH1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.32■□□□□ 0.68
RNF25Q96BH1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF25Q96BH1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF25Q96BH1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RNF25Q96BH1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RNF25Q96BH1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RNF25Q96BH1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF25Q96BH1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF25Q96BH1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF25Q96BH1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF25Q96BH1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF25Q96BH1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RNF25Q96BH1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF25Q96BH1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF25Q96BH1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF25Q96BH1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF25Q96BH1 BCL2-203ENST00000589955 5011 ntBASIC19.31■□□□□ 0.68
RNF25Q96BH1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF25Q96BH1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF25Q96BH1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF25Q96BH1 ESPNP-201ENST00000270691 2015 ntBASIC19.31■□□□□ 0.68
RNF25Q96BH1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF25Q96BH1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF25Q96BH1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF25Q96BH1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RNF25Q96BH1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF25Q96BH1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms