Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
RTF1Q92541 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RTF1Q92541 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
RTF1Q92541 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC23.93■■□□□ 1.42
RTF1Q92541 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTF1Q92541 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
RTF1Q92541 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
RTF1Q92541 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTF1Q92541 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTF1Q92541 SNCG-201ENST00000348795 684 ntTSL 2 BASIC23.93■■□□□ 1.42
RTF1Q92541 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC23.93■■□□□ 1.42
RTF1Q92541 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC23.93■■□□□ 1.42
RTF1Q92541 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC23.93■■□□□ 1.42
RTF1Q92541 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC23.93■■□□□ 1.42
RTF1Q92541 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC23.93■■□□□ 1.42
RTF1Q92541 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC23.93■■□□□ 1.42
RTF1Q92541 AC004263.2-201ENST00000617183 678 ntBASIC23.93■■□□□ 1.42
RTF1Q92541 AC124864.1-201ENST00000623408 392 ntBASIC23.93■■□□□ 1.42
RTF1Q92541 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC23.93■■□□□ 1.42
RTF1Q92541 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTF1Q92541 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC23.93■■□□□ 1.42
RTF1Q92541 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
RTF1Q92541 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTF1Q92541 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTF1Q92541 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RTF1Q92541 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
RTF1Q92541 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC23.93■■□□□ 1.42
RTF1Q92541 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTF1Q92541 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC23.92■■□□□ 1.42
RTF1Q92541 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.92■■□□□ 1.42
RTF1Q92541 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
RTF1Q92541 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RTF1Q92541 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RTF1Q92541 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTF1Q92541 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC23.92■■□□□ 1.42
RTF1Q92541 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
RTF1Q92541 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC23.92■■□□□ 1.42
RTF1Q92541 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTF1Q92541 AL592071.1-201ENST00000611956 408 ntBASIC23.92■■□□□ 1.42
RTF1Q92541 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTF1Q92541 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTF1Q92541 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC23.92■■□□□ 1.42
RTF1Q92541 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
RTF1Q92541 ADK-206ENST00000541550 2222 ntTSL 2 BASIC23.91■■□□□ 1.42
RTF1Q92541 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTF1Q92541 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RTF1Q92541 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTF1Q92541 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC23.91■■□□□ 1.42
RTF1Q92541 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTF1Q92541 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTF1Q92541 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTF1Q92541 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTF1Q92541 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTF1Q92541 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
RTF1Q92541 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTF1Q92541 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTF1Q92541 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTF1Q92541 PP7080-204ENST00000510714 601 ntTSL 3 BASIC23.91■■□□□ 1.42
RTF1Q92541 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTF1Q92541 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.91■■□□□ 1.42
RTF1Q92541 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
RTF1Q92541 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTF1Q92541 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTF1Q92541 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTF1Q92541 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
RTF1Q92541 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTF1Q92541 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC23.91■■□□□ 1.42
RTF1Q92541 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTF1Q92541 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTF1Q92541 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RTF1Q92541 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTF1Q92541 AC005082.1-201ENST00000413042 2259 ntBASIC23.9■■□□□ 1.42
RTF1Q92541 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC23.9■■□□□ 1.42
RTF1Q92541 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC23.9■■□□□ 1.42
RTF1Q92541 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC23.9■■□□□ 1.42
RTF1Q92541 AL024508.2-201ENST00000607749 1894 ntBASIC23.9■■□□□ 1.42
RTF1Q92541 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
RTF1Q92541 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTF1Q92541 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTF1Q92541 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTF1Q92541 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTF1Q92541 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTF1Q92541 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTF1Q92541 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC23.9■■□□□ 1.42
RTF1Q92541 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RTF1Q92541 AC113404.2-201ENST00000507884 177 ntBASIC23.9■■□□□ 1.42
RTF1Q92541 SKP2-204ENST00000508514 821 ntTSL 3 BASIC23.9■■□□□ 1.42
RTF1Q92541 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC23.9■■□□□ 1.42
RTF1Q92541 SDHD-206ENST00000528182 754 ntTSL 3 BASIC23.9■■□□□ 1.42
RTF1Q92541 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC23.9■■□□□ 1.42
RTF1Q92541 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC23.9■■□□□ 1.42
RTF1Q92541 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RTF1Q92541 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTF1Q92541 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTF1Q92541 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC23.9■■□□□ 1.42
RTF1Q92541 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RTF1Q92541 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RTF1Q92541 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.42
RTF1Q92541 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
RTF1Q92541 AL031598.1-201ENST00000561511 1773 ntBASIC23.89■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms