Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 AC138028.4-201ENST00000564984 1845 ntBASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 NIFKP9-201ENST00000419265 221 ntBASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 PKD1P1-201ENST00000458669 6805 ntBASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40AQ8WXH6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 C1QL1P1-201ENST00000568105 661 ntBASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 AC073912.3-201ENST00000624414 853 ntBASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB40AQ8WXH6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms