Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 MYC-208ENST00000641036 567 ntBASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 LINC00896-202ENST00000609602 2128 ntBASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 RCC2P6-201ENST00000526625 1557 ntBASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 RPS2P55-201ENST00000397318 883 ntBASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 AC107956.1-201ENST00000494359 873 ntBASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 AP001412.1-201ENST00000608405 714 ntBASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RTN4IP1Q8WWV3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 MTMR9LP-203ENST00000426597 1545 ntBASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 FAM197Y1-201ENST00000421178 764 ntBASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 AC012618.2-201ENST00000428058 849 ntBASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms