Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 SDHAP2-201ENST00000455183 2001 ntBASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 FSCN1P1-201ENST00000568912 1481 ntBASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 AC012317.2-201ENST00000623305 2251 ntBASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 SIRPAP1-201ENST00000448467 1770 ntBASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 AL645608.8-201ENST00000606034 2086 ntBASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 C1QBPP2-201ENST00000528754 825 ntBASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC44A1Q8WWI5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 AC099343.3-201ENST00000605834 2503 ntBASIC18.41■□□□□ 0.54
SLC44A1Q8WWI5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms