Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHD6Q8TD26 FO538757.1-201ENST00000623083 1397 ntBASIC16.46■□□□□ 0.22
CHD6Q8TD26 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHD6Q8TD26 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.46■□□□□ 0.22
CHD6Q8TD26 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.46■□□□□ 0.22
CHD6Q8TD26 BX005266.1-201ENST00000473402 457 ntBASIC16.46■□□□□ 0.22
CHD6Q8TD26 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CHD6Q8TD26 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.46■□□□□ 0.22
CHD6Q8TD26 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CHD6Q8TD26 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.46■□□□□ 0.22
CHD6Q8TD26 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.46■□□□□ 0.22
CHD6Q8TD26 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.46■□□□□ 0.22
CHD6Q8TD26 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.46■□□□□ 0.22
CHD6Q8TD26 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.46■□□□□ 0.22
CHD6Q8TD26 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.22
CHD6Q8TD26 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CHD6Q8TD26 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.46■□□□□ 0.22
CHD6Q8TD26 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
CHD6Q8TD26 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD6Q8TD26 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHD6Q8TD26 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.45■□□□□ 0.22
CHD6Q8TD26 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD6Q8TD26 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.45■□□□□ 0.22
CHD6Q8TD26 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHD6Q8TD26 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.45■□□□□ 0.22
CHD6Q8TD26 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD6Q8TD26 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.45■□□□□ 0.22
CHD6Q8TD26 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.45■□□□□ 0.22
CHD6Q8TD26 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.45■□□□□ 0.22
CHD6Q8TD26 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.45■□□□□ 0.22
CHD6Q8TD26 AP001059.3-201ENST00000619053 235 ntBASIC16.45■□□□□ 0.22
CHD6Q8TD26 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD6Q8TD26 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHD6Q8TD26 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD6Q8TD26 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CHD6Q8TD26 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHD6Q8TD26 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.45■□□□□ 0.22
CHD6Q8TD26 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.45■□□□□ 0.22
CHD6Q8TD26 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.45■□□□□ 0.22
CHD6Q8TD26 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.44■□□□□ 0.22
CHD6Q8TD26 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD6Q8TD26 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD6Q8TD26 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.44■□□□□ 0.22
CHD6Q8TD26 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.44■□□□□ 0.22
CHD6Q8TD26 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD6Q8TD26 MRPS18AP1-201ENST00000414458 589 ntBASIC16.44■□□□□ 0.22
CHD6Q8TD26 KRT17P7-201ENST00000451704 1104 ntBASIC16.44■□□□□ 0.22
CHD6Q8TD26 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.44■□□□□ 0.22
CHD6Q8TD26 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.44■□□□□ 0.22
CHD6Q8TD26 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.44■□□□□ 0.22
CHD6Q8TD26 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD6Q8TD26 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD6Q8TD26 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHD6Q8TD26 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
CHD6Q8TD26 FAM58DP-201ENST00000428076 619 ntBASIC16.44■□□□□ 0.22
CHD6Q8TD26 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.44■□□□□ 0.22
CHD6Q8TD26 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.44■□□□□ 0.22
CHD6Q8TD26 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.44■□□□□ 0.22
CHD6Q8TD26 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.44■□□□□ 0.22
CHD6Q8TD26 AC140878.1-201ENST00000565277 250 ntBASIC16.44■□□□□ 0.22
CHD6Q8TD26 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.44■□□□□ 0.22
CHD6Q8TD26 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHD6Q8TD26 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.44■□□□□ 0.22
CHD6Q8TD26 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHD6Q8TD26 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD6Q8TD26 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD6Q8TD26 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.43■□□□□ 0.22
CHD6Q8TD26 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHD6Q8TD26 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHD6Q8TD26 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD6Q8TD26 AC006333.2-201ENST00000607957 2099 ntBASIC16.43■□□□□ 0.22
CHD6Q8TD26 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD6Q8TD26 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHD6Q8TD26 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD6Q8TD26 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.43■□□□□ 0.22
CHD6Q8TD26 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
CHD6Q8TD26 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD6Q8TD26 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.43■□□□□ 0.22
CHD6Q8TD26 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD6Q8TD26 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD6Q8TD26 TUBB3P1-201ENST00000405796 1332 ntBASIC16.43■□□□□ 0.22
CHD6Q8TD26 AC129492.6-201ENST00000611383 1305 ntBASIC16.43■□□□□ 0.22
CHD6Q8TD26 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD6Q8TD26 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHD6Q8TD26 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHD6Q8TD26 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.43■□□□□ 0.22
CHD6Q8TD26 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CHD6Q8TD26 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHD6Q8TD26 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.43■□□□□ 0.22
CHD6Q8TD26 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.43■□□□□ 0.22
CHD6Q8TD26 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHD6Q8TD26 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD6Q8TD26 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHD6Q8TD26 SIGLEC16-201ENST00000599858 1437 ntBASIC16.42■□□□□ 0.22
CHD6Q8TD26 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.42■□□□□ 0.22
CHD6Q8TD26 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHD6Q8TD26 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.42■□□□□ 0.22
CHD6Q8TD26 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.42■□□□□ 0.22
CHD6Q8TD26 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.42■□□□□ 0.22
CHD6Q8TD26 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms