Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LNX1Q8TBB1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.02■□□□□ 0.8
LNX1Q8TBB1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
LNX1Q8TBB1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.02■□□□□ 0.8
LNX1Q8TBB1 AC034232.1-201ENST00000506026 1064 ntBASIC20.02■□□□□ 0.8
LNX1Q8TBB1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.02■□□□□ 0.8
LNX1Q8TBB1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LNX1Q8TBB1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.02■□□□□ 0.8
LNX1Q8TBB1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.02■□□□□ 0.8
LNX1Q8TBB1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.02■□□□□ 0.8
LNX1Q8TBB1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.02■□□□□ 0.8
LNX1Q8TBB1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LNX1Q8TBB1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LNX1Q8TBB1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LNX1Q8TBB1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LNX1Q8TBB1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
LNX1Q8TBB1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LNX1Q8TBB1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
LNX1Q8TBB1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
LNX1Q8TBB1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.02■□□□□ 0.79
LNX1Q8TBB1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
LNX1Q8TBB1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 AL357033.4-201ENST00000617703 1807 ntBASIC20.01■□□□□ 0.79
LNX1Q8TBB1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LNX1Q8TBB1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20■□□□□ 0.79
LNX1Q8TBB1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LNX1Q8TBB1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LNX1Q8TBB1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20■□□□□ 0.79
LNX1Q8TBB1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LNX1Q8TBB1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LNX1Q8TBB1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LNX1Q8TBB1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LNX1Q8TBB1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20■□□□□ 0.79
LNX1Q8TBB1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
LNX1Q8TBB1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LNX1Q8TBB1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20■□□□□ 0.79
LNX1Q8TBB1 KRT18P48-201ENST00000434763 852 ntBASIC20■□□□□ 0.79
LNX1Q8TBB1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
LNX1Q8TBB1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20■□□□□ 0.79
LNX1Q8TBB1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LNX1Q8TBB1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LNX1Q8TBB1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20■□□□□ 0.79
LNX1Q8TBB1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LNX1Q8TBB1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LNX1Q8TBB1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LNX1Q8TBB1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LNX1Q8TBB1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
LNX1Q8TBB1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LNX1Q8TBB1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LNX1Q8TBB1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20■□□□□ 0.79
LNX1Q8TBB1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LNX1Q8TBB1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LNX1Q8TBB1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
LNX1Q8TBB1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.99■□□□□ 0.79
LNX1Q8TBB1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LNX1Q8TBB1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LNX1Q8TBB1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LNX1Q8TBB1 RCC2P3-201ENST00000418112 1537 ntBASIC19.99■□□□□ 0.79
LNX1Q8TBB1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.99■□□□□ 0.79
LNX1Q8TBB1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LNX1Q8TBB1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.99■□□□□ 0.79
LNX1Q8TBB1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.99■□□□□ 0.79
LNX1Q8TBB1 SEC1P-202ENST00000473944 940 ntBASIC19.99■□□□□ 0.79
LNX1Q8TBB1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.99■□□□□ 0.79
LNX1Q8TBB1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.99■□□□□ 0.79
LNX1Q8TBB1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.99■□□□□ 0.79
LNX1Q8TBB1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.99■□□□□ 0.79
LNX1Q8TBB1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.99■□□□□ 0.79
LNX1Q8TBB1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LNX1Q8TBB1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LNX1Q8TBB1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LNX1Q8TBB1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LNX1Q8TBB1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
LNX1Q8TBB1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LNX1Q8TBB1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.99■□□□□ 0.79
LNX1Q8TBB1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LNX1Q8TBB1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms