Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCC2Q8TAQ2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCC2Q8TAQ2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCC2Q8TAQ2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.53■■□□□ 1.04
SMARCC2Q8TAQ2 RNF152P1-201ENST00000397754 604 ntBASIC21.53■■□□□ 1.04
SMARCC2Q8TAQ2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCC2Q8TAQ2 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.53■■□□□ 1.04
SMARCC2Q8TAQ2 WWOX-216ENST00000569818 525 ntBASIC21.53■■□□□ 1.04
SMARCC2Q8TAQ2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.53■■□□□ 1.04
SMARCC2Q8TAQ2 AL031432.5-201ENST00000641059 760 ntBASIC21.53■■□□□ 1.04
SMARCC2Q8TAQ2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.53■■□□□ 1.04
SMARCC2Q8TAQ2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCC2Q8TAQ2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.53■■□□□ 1.04
SMARCC2Q8TAQ2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCC2Q8TAQ2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SMARCC2Q8TAQ2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.53■■□□□ 1.04
SMARCC2Q8TAQ2 HOXB1-202ENST00000577092 1414 ntBASIC21.53■■□□□ 1.04
SMARCC2Q8TAQ2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.53■■□□□ 1.04
SMARCC2Q8TAQ2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCC2Q8TAQ2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCC2Q8TAQ2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 AP000523.1-201ENST00000398242 1049 ntBASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 AC011558.1-201ENST00000623459 338 ntBASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCC2Q8TAQ2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
SMARCC2Q8TAQ2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.52■■□□□ 1.03
SMARCC2Q8TAQ2 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.52■■□□□ 1.03
SMARCC2Q8TAQ2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
SMARCC2Q8TAQ2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SMARCC2Q8TAQ2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SMARCC2Q8TAQ2 AL133373.2-201ENST00000623187 2828 ntBASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 AL445228.2-201ENST00000605589 952 ntBASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC2Q8TAQ2 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 TSPY5P-201ENST00000426936 936 ntBASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 KRT18P35-201ENST00000510488 1269 ntBASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 NEK4P2-201ENST00000580004 1012 ntBASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
SMARCC2Q8TAQ2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms