Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 COX11P1-201ENST00000489116 835 ntBASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 AC010240.3-201ENST00000607688 395 ntBASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 AC024243.1-201ENST00000609234 778 ntBASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.55■□□□□ 0.4
SRFBP1Q8NEF9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 TERF1P1-201ENST00000311003 1181 ntBASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 SEC1P-202ENST00000473944 940 ntBASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 AC034232.1-201ENST00000506026 1064 ntBASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 AC010203.1-204ENST00000548782 407 ntBASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
SRFBP1Q8NEF9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.53■□□□□ 0.4
SRFBP1Q8NEF9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms