Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DTX3Q8N9I9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DTX3Q8N9I9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
DTX3Q8N9I9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DTX3Q8N9I9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DTX3Q8N9I9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DTX3Q8N9I9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DTX3Q8N9I9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 KRT8P8-201ENST00000434750 1448 ntBASIC16.28■□□□□ 0.2
DTX3Q8N9I9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DTX3Q8N9I9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DTX3Q8N9I9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DTX3Q8N9I9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.27■□□□□ 0.2
DTX3Q8N9I9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DTX3Q8N9I9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.27■□□□□ 0.2
DTX3Q8N9I9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DTX3Q8N9I9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DTX3Q8N9I9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DTX3Q8N9I9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DTX3Q8N9I9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DTX3Q8N9I9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DTX3Q8N9I9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
DTX3Q8N9I9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DTX3Q8N9I9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DTX3Q8N9I9 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.27■□□□□ 0.2
DTX3Q8N9I9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.27■□□□□ 0.2
DTX3Q8N9I9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
DTX3Q8N9I9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.27■□□□□ 0.2
DTX3Q8N9I9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
DTX3Q8N9I9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DTX3Q8N9I9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.27■□□□□ 0.2
DTX3Q8N9I9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
DTX3Q8N9I9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.27■□□□□ 0.19
DTX3Q8N9I9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
DTX3Q8N9I9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.27■□□□□ 0.19
DTX3Q8N9I9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
DTX3Q8N9I9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
DTX3Q8N9I9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
DTX3Q8N9I9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
DTX3Q8N9I9 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
DTX3Q8N9I9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 AL645608.8-201ENST00000606034 2086 ntBASIC16.26■□□□□ 0.19
DTX3Q8N9I9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 AC018695.7-201ENST00000624587 2492 ntBASIC16.26■□□□□ 0.19
DTX3Q8N9I9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 MST1L-201ENST00000442552 2185 ntBASIC16.26■□□□□ 0.19
DTX3Q8N9I9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 ESRRAP1-201ENST00000400596 1257 ntBASIC16.26■□□□□ 0.19
DTX3Q8N9I9 AC026366.1-201ENST00000488803 879 ntBASIC16.26■□□□□ 0.19
DTX3Q8N9I9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 UNC93B5-201ENST00000530315 699 ntBASIC16.26■□□□□ 0.19
DTX3Q8N9I9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 AC083880.1-201ENST00000608266 535 ntBASIC16.26■□□□□ 0.19
DTX3Q8N9I9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DTX3Q8N9I9 AC012317.2-201ENST00000623305 2251 ntBASIC16.26■□□□□ 0.19
DTX3Q8N9I9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms