Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 STARP1-201ENST00000397973 869 ntBASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 AL357033.4-201ENST00000617703 1807 ntBASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC33Q8N5R6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 SPDYE15P-201ENST00000424157 909 ntBASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 DUSP5P1-201ENST00000441325 1139 ntBASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 HYMAI.1-201ENST00000620949 238 ntBASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 CR769767.2-201ENST00000622735 460 ntBASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CCDC33Q8N5R6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 AL023284.2-201ENST00000405850 579 ntBASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC33Q8N5R6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.27■□□□□ 0.67
CCDC33Q8N5R6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC33Q8N5R6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC33Q8N5R6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC33Q8N5R6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC33Q8N5R6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CCDC33Q8N5R6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms