Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AC067852.2-201ENST00000590513 2313 ntBASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 AC124016.1-201ENST00000609552 612 ntBASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 GXYLT1P5-201ENST00000614548 1189 ntBASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 AC130371.2-201ENST00000619443 611 ntBASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 REXO1L9P-201ENST00000604264 2108 ntBASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 MCCD1P1-208ENST00000445732 328 ntBASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 AC009053.2-201ENST00000563701 2365 ntBASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01561Q8N1V8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 AC124067.4-201ENST00000519691 2379 ntBASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms