Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SIX5Q8N196 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SIX5Q8N196 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
SIX5Q8N196 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.77■□□□□ 0.6
SIX5Q8N196 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SIX5Q8N196 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIX5Q8N196 RCN1P2-201ENST00000398357 915 ntBASIC18.77■□□□□ 0.6
SIX5Q8N196 MED15P5-201ENST00000423150 992 ntBASIC18.77■□□□□ 0.6
SIX5Q8N196 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.77■□□□□ 0.6
SIX5Q8N196 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SIX5Q8N196 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.77■□□□□ 0.6
SIX5Q8N196 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.77■□□□□ 0.6
SIX5Q8N196 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.77■□□□□ 0.6
SIX5Q8N196 AC027796.2-201ENST00000575326 344 ntBASIC18.77■□□□□ 0.6
SIX5Q8N196 AL356488.2-201ENST00000602755 427 ntBASIC18.77■□□□□ 0.6
SIX5Q8N196 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SIX5Q8N196 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SIX5Q8N196 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SIX5Q8N196 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SIX5Q8N196 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SIX5Q8N196 KRT8P32-201ENST00000512863 1461 ntBASIC18.77■□□□□ 0.59
SIX5Q8N196 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIX5Q8N196 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIX5Q8N196 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIX5Q8N196 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
SIX5Q8N196 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
SIX5Q8N196 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SIX5Q8N196 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIX5Q8N196 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIX5Q8N196 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIX5Q8N196 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIX5Q8N196 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.76■□□□□ 0.59
SIX5Q8N196 RBM17P3-201ENST00000417687 1192 ntBASIC18.76■□□□□ 0.59
SIX5Q8N196 RPS8P6-201ENST00000426177 609 ntBASIC18.76■□□□□ 0.59
SIX5Q8N196 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIX5Q8N196 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIX5Q8N196 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.76■□□□□ 0.59
SIX5Q8N196 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIX5Q8N196 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.76■□□□□ 0.59
SIX5Q8N196 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.76■□□□□ 0.59
SIX5Q8N196 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIX5Q8N196 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIX5Q8N196 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.76■□□□□ 0.59
SIX5Q8N196 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIX5Q8N196 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.76■□□□□ 0.59
SIX5Q8N196 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SIX5Q8N196 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIX5Q8N196 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SIX5Q8N196 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SIX5Q8N196 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SIX5Q8N196 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.75■□□□□ 0.59
SIX5Q8N196 AC022898.2-201ENST00000616822 1312 ntBASIC18.75■□□□□ 0.59
SIX5Q8N196 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SIX5Q8N196 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX5Q8N196 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SIX5Q8N196 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.75■□□□□ 0.59
SIX5Q8N196 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX5Q8N196 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.75■□□□□ 0.59
SIX5Q8N196 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX5Q8N196 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX5Q8N196 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX5Q8N196 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX5Q8N196 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.75■□□□□ 0.59
SIX5Q8N196 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX5Q8N196 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SIX5Q8N196 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.75■□□□□ 0.59
SIX5Q8N196 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.75■□□□□ 0.59
SIX5Q8N196 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.75■□□□□ 0.59
SIX5Q8N196 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SIX5Q8N196 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.75■□□□□ 0.59
SIX5Q8N196 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.75■□□□□ 0.59
SIX5Q8N196 AC145285.3-201ENST00000564603 959 ntBASIC18.75■□□□□ 0.59
SIX5Q8N196 AP001160.2-201ENST00000596071 487 ntBASIC18.75■□□□□ 0.59
SIX5Q8N196 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.75■□□□□ 0.59
SIX5Q8N196 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX5Q8N196 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SIX5Q8N196 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.75■□□□□ 0.59
SIX5Q8N196 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX5Q8N196 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.75■□□□□ 0.59
SIX5Q8N196 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX5Q8N196 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX5Q8N196 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.75■□□□□ 0.59
SIX5Q8N196 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SIX5Q8N196 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX5Q8N196 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.75■□□□□ 0.59
SIX5Q8N196 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX5Q8N196 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX5Q8N196 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX5Q8N196 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX5Q8N196 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX5Q8N196 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SIX5Q8N196 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SIX5Q8N196 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.74■□□□□ 0.59
SIX5Q8N196 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.74■□□□□ 0.59
SIX5Q8N196 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIX5Q8N196 AL020996.1-203ENST00000536896 2307 ntBASIC18.74■□□□□ 0.59
SIX5Q8N196 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SIX5Q8N196 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIX5Q8N196 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIX5Q8N196 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms