Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 KRT8P50-201ENST00000562022 1438 ntBASIC18.69■□□□□ 0.58
CHPFQ8IZ52 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 TSPY19P-201ENST00000418461 509 ntBASIC18.69■□□□□ 0.58
CHPFQ8IZ52 AC246785.2-201ENST00000432512 513 ntBASIC18.69■□□□□ 0.58
CHPFQ8IZ52 TSPY18P-201ENST00000441642 509 ntBASIC18.69■□□□□ 0.58
CHPFQ8IZ52 FOSL1P1-201ENST00000511041 816 ntBASIC18.69■□□□□ 0.58
CHPFQ8IZ52 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 AC091304.2-201ENST00000564639 760 ntBASIC18.69■□□□□ 0.58
CHPFQ8IZ52 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 AL732292.2-201ENST00000609649 430 ntBASIC18.69■□□□□ 0.58
CHPFQ8IZ52 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 AC004408.2-201ENST00000623613 2777 ntBASIC18.69■□□□□ 0.58
CHPFQ8IZ52 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHPFQ8IZ52 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 GUSBP12-201ENST00000513727 720 ntBASIC18.68■□□□□ 0.58
CHPFQ8IZ52 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 AC120498.9-201ENST00000339021 3867 ntBASIC18.68■□□□□ 0.58
CHPFQ8IZ52 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHPFQ8IZ52 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHPFQ8IZ52 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CHPFQ8IZ52 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CHPFQ8IZ52 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHPFQ8IZ52 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.67■□□□□ 0.58
CHPFQ8IZ52 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.67■□□□□ 0.58
CHPFQ8IZ52 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHPFQ8IZ52 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHPFQ8IZ52 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CHPFQ8IZ52 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.67■□□□□ 0.58
CHPFQ8IZ52 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
CHPFQ8IZ52 AC074051.2-201ENST00000565115 352 ntBASIC18.67■□□□□ 0.58
CHPFQ8IZ52 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.67■□□□□ 0.58
CHPFQ8IZ52 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.67■□□□□ 0.58
CHPFQ8IZ52 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHPFQ8IZ52 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHPFQ8IZ52 MTMR9LP-203ENST00000426597 1545 ntBASIC18.67■□□□□ 0.58
CHPFQ8IZ52 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.67■□□□□ 0.58
CHPFQ8IZ52 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHPFQ8IZ52 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHPFQ8IZ52 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CHPFQ8IZ52 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHPFQ8IZ52 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHPFQ8IZ52 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 LINC00167-201ENST00000530583 1419 ntBASIC18.66■□□□□ 0.58
CHPFQ8IZ52 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms