Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
CHD1LQ86WJ1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHD1LQ86WJ1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHD1LQ86WJ1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHD1LQ86WJ1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC22.71■■□□□ 1.23
CHD1LQ86WJ1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC22.71■■□□□ 1.23
CHD1LQ86WJ1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHD1LQ86WJ1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CHD1LQ86WJ1 LINC01126-201ENST00000623515 1646 ntBASIC22.71■■□□□ 1.23
CHD1LQ86WJ1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHD1LQ86WJ1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CHD1LQ86WJ1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC22.71■■□□□ 1.23
CHD1LQ86WJ1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHD1LQ86WJ1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
CHD1LQ86WJ1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
CHD1LQ86WJ1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHD1LQ86WJ1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
CHD1LQ86WJ1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CHD1LQ86WJ1 MMP23A-201ENST00000234610 1017 ntBASIC22.7■■□□□ 1.22
CHD1LQ86WJ1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
CHD1LQ86WJ1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHD1LQ86WJ1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC22.7■■□□□ 1.22
CHD1LQ86WJ1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
CHD1LQ86WJ1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
CHD1LQ86WJ1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CHD1LQ86WJ1 FLJ13224-201ENST00000313737 1514 ntBASIC22.7■■□□□ 1.22
CHD1LQ86WJ1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
CHD1LQ86WJ1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHD1LQ86WJ1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHD1LQ86WJ1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
CHD1LQ86WJ1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHD1LQ86WJ1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
CHD1LQ86WJ1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHD1LQ86WJ1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 NAPSB-206ENST00000562112 1266 ntBASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 FAM87A-204ENST00000613235 858 ntBASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC22.69■■□□□ 1.22
CHD1LQ86WJ1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 SLC25A6P5-201ENST00000435663 894 ntBASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 AC128688.1-201ENST00000487626 519 ntBASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 MIR3180-4-201ENST00000582223 153 ntBASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD1LQ86WJ1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 AL596275.1-201ENST00000423464 877 ntBASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms