Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 HYI-206ENST00000372434 1025 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC00173Q6ZV60 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC00173Q6ZV60 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC00173Q6ZV60 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 MST1L-201ENST00000442552 2185 ntBASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 KRT18P68-201ENST00000392293 1000 ntBASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 RARRES2P4-201ENST00000514074 484 ntBASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00173Q6ZV60 AC006116.8-202ENST00000587620 1550 ntBASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 RAB43-208ENST00000615093 783 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 AC013268.1-206ENST00000638368 961 ntBASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 AC112229.1-201ENST00000639295 961 ntBASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00173Q6ZV60 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms