Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 KRT8P36-201ENST00000489121 1440 ntBASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 SLC25A6P5-201ENST00000435663 894 ntBASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 AC010141.2-201ENST00000452426 721 ntBASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 AC138907.5-202ENST00000569484 235 ntBASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 UBE2DNL-204ENST00000602536 740 ntBASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 PKD1P5-201ENST00000532415 10291 ntBASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 EEF1DP3-203ENST00000566025 782 ntBASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 AC053503.5-201ENST00000601508 636 ntBASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 AC011767.1-201ENST00000617410 1153 ntBASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 AC132872.4-202ENST00000622924 2756 ntBASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM88Q6PEY1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 PCDHB17P-201ENST00000539533 2393 ntBASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM88Q6PEY1 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms