Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.64■□□□□ 0.42
PPP4R4Q6NUP7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PPP4R4Q6NUP7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PPP4R4Q6NUP7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 MIR718-201ENST00000390190 70 ntBASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PPP4R4Q6NUP7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPP4R4Q6NUP7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 AC133681.1-201ENST00000465482 601 ntBASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 PCDHA12-202ENST00000613593 2588 ntBASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPP4R4Q6NUP7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms