Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 NEFHP1-201ENST00000412845 2629 ntBASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 AC135050.7-201ENST00000624508 2218 ntBASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HIST2H2AA3Q6FI13 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIST2H2AA3Q6FI13 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.77■□□□□ 0.43
HIST2H2AA3Q6FI13 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIST2H2AA3Q6FI13 AL163051.1-201ENST00000569214 1512 ntBASIC17.77■□□□□ 0.43
HIST2H2AA3Q6FI13 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIST2H2AA3Q6FI13 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 BICD1-207ENST00000551848 1962 ntBASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.76■□□□□ 0.43
HIST2H2AA3Q6FI13 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H2AA3Q6FI13 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H2AA3Q6FI13 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H2AA3Q6FI13 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
HIST2H2AA3Q6FI13 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.75■□□□□ 0.43
HIST2H2AA3Q6FI13 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.75■□□□□ 0.43
HIST2H2AA3Q6FI13 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.75■□□□□ 0.43
HIST2H2AA3Q6FI13 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H2AA3Q6FI13 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H2AA3Q6FI13 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
HIST2H2AA3Q6FI13 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H2AA3Q6FI13 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H2AA3Q6FI13 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H2AA3Q6FI13 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
HIST2H2AA3Q6FI13 AC087499.1-201ENST00000418141 1075 ntBASIC17.75■□□□□ 0.43
HIST2H2AA3Q6FI13 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.75■□□□□ 0.43
HIST2H2AA3Q6FI13 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms