Protein–RNA interactions for Protein: Q68G74

LHX8, LIM/homeobox protein Lhx8, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX8Q68G74 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LHX8Q68G74 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LHX8Q68G74 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LHX8Q68G74 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LHX8Q68G74 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.27■□□□□ 0.84
LHX8Q68G74 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LHX8Q68G74 AC023274.1-201ENST00000418278 595 ntBASIC20.27■□□□□ 0.84
LHX8Q68G74 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.27■□□□□ 0.84
LHX8Q68G74 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.27■□□□□ 0.84
LHX8Q68G74 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LHX8Q68G74 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.27■□□□□ 0.84
LHX8Q68G74 AC002347.1-201ENST00000569543 541 ntBASIC20.27■□□□□ 0.84
LHX8Q68G74 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LHX8Q68G74 AC099343.3-201ENST00000605834 2503 ntBASIC20.27■□□□□ 0.84
LHX8Q68G74 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LHX8Q68G74 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LHX8Q68G74 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LHX8Q68G74 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LHX8Q68G74 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LHX8Q68G74 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.26■□□□□ 0.83
LHX8Q68G74 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LHX8Q68G74 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LHX8Q68G74 SDHAP2-201ENST00000455183 2001 ntBASIC20.26■□□□□ 0.83
LHX8Q68G74 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LHX8Q68G74 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LHX8Q68G74 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LHX8Q68G74 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LHX8Q68G74 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LHX8Q68G74 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.26■□□□□ 0.83
LHX8Q68G74 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.26■□□□□ 0.83
LHX8Q68G74 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.26■□□□□ 0.83
LHX8Q68G74 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.26■□□□□ 0.83
LHX8Q68G74 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.26■□□□□ 0.83
LHX8Q68G74 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.26■□□□□ 0.83
LHX8Q68G74 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LHX8Q68G74 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LHX8Q68G74 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
LHX8Q68G74 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LHX8Q68G74 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LHX8Q68G74 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LHX8Q68G74 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.25■□□□□ 0.83
LHX8Q68G74 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX8Q68G74 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX8Q68G74 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LHX8Q68G74 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX8Q68G74 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX8Q68G74 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LHX8Q68G74 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX8Q68G74 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.25■□□□□ 0.83
LHX8Q68G74 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX8Q68G74 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX8Q68G74 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.25■□□□□ 0.83
LHX8Q68G74 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.25■□□□□ 0.83
LHX8Q68G74 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.25■□□□□ 0.83
LHX8Q68G74 MTDHP5-201ENST00000598980 586 ntBASIC20.25■□□□□ 0.83
LHX8Q68G74 AP000240.1-201ENST00000609910 452 ntBASIC20.25■□□□□ 0.83
LHX8Q68G74 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX8Q68G74 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LHX8Q68G74 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX8Q68G74 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LHX8Q68G74 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LHX8Q68G74 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.25■□□□□ 0.83
LHX8Q68G74 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LHX8Q68G74 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LHX8Q68G74 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX8Q68G74 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LHX8Q68G74 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LHX8Q68G74 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LHX8Q68G74 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LHX8Q68G74 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LHX8Q68G74 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LHX8Q68G74 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.24■□□□□ 0.83
LHX8Q68G74 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LHX8Q68G74 AP006288.1-201ENST00000446065 395 ntBASIC20.24■□□□□ 0.83
LHX8Q68G74 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LHX8Q68G74 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LHX8Q68G74 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.24■□□□□ 0.83
LHX8Q68G74 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.24■□□□□ 0.83
LHX8Q68G74 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.24■□□□□ 0.83
LHX8Q68G74 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.24■□□□□ 0.83
LHX8Q68G74 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.24■□□□□ 0.83
LHX8Q68G74 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
LHX8Q68G74 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.24■□□□□ 0.83
LHX8Q68G74 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LHX8Q68G74 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.24■□□□□ 0.83
LHX8Q68G74 AP000867.4-201ENST00000641616 219 ntBASIC20.24■□□□□ 0.83
LHX8Q68G74 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LHX8Q68G74 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LHX8Q68G74 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LHX8Q68G74 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LHX8Q68G74 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LHX8Q68G74 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LHX8Q68G74 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.24■□□□□ 0.83
LHX8Q68G74 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.23■□□□□ 0.83
LHX8Q68G74 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.23■□□□□ 0.83
LHX8Q68G74 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LHX8Q68G74 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LHX8Q68G74 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LHX8Q68G74 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LHX8Q68G74 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms