Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.34■□□□□ 0.37
LPCAT4Q643R3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
LPCAT4Q643R3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
LPCAT4Q643R3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LPCAT4Q643R3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LPCAT4Q643R3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LPCAT4Q643R3 AL357033.4-201ENST00000617703 1807 ntBASIC17.33■□□□□ 0.37
LPCAT4Q643R3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LPCAT4Q643R3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LPCAT4Q643R3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.33■□□□□ 0.37
LPCAT4Q643R3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.33■□□□□ 0.37
LPCAT4Q643R3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
LPCAT4Q643R3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.33■□□□□ 0.36
LPCAT4Q643R3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LPCAT4Q643R3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LPCAT4Q643R3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
LPCAT4Q643R3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LPCAT4Q643R3 BID-214ENST00000617586 542 ntTSL 5 BASIC17.33■□□□□ 0.36
LPCAT4Q643R3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.33■□□□□ 0.36
LPCAT4Q643R3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.33■□□□□ 0.36
LPCAT4Q643R3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
LPCAT4Q643R3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.33■□□□□ 0.36
LPCAT4Q643R3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LPCAT4Q643R3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LPCAT4Q643R3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LPCAT4Q643R3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LPCAT4Q643R3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LPCAT4Q643R3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LPCAT4Q643R3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 CNN2P6-201ENST00000439038 900 ntBASIC17.32■□□□□ 0.36
LPCAT4Q643R3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 KRT18P16-201ENST00000510337 1294 ntBASIC17.32■□□□□ 0.36
LPCAT4Q643R3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.32■□□□□ 0.36
LPCAT4Q643R3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.31■□□□□ 0.36
LPCAT4Q643R3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 AC010980.2-201ENST00000587099 1412 ntBASIC17.31■□□□□ 0.36
LPCAT4Q643R3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 KRT18P11-201ENST00000435214 1283 ntBASIC17.31■□□□□ 0.36
LPCAT4Q643R3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 AC008741.2-201ENST00000612792 3115 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms