Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
LYSMD4Q5XG99 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.99■□□□□ 0.47
LYSMD4Q5XG99 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.99■□□□□ 0.47
LYSMD4Q5XG99 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.99■□□□□ 0.47
LYSMD4Q5XG99 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.99■□□□□ 0.47
LYSMD4Q5XG99 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.99■□□□□ 0.47
LYSMD4Q5XG99 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LYSMD4Q5XG99 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LYSMD4Q5XG99 INTS4P1-201ENST00000438455 1935 ntBASIC17.99■□□□□ 0.47
LYSMD4Q5XG99 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LYSMD4Q5XG99 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LYSMD4Q5XG99 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
LYSMD4Q5XG99 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LYSMD4Q5XG99 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LYSMD4Q5XG99 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
LYSMD4Q5XG99 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.99■□□□□ 0.47
LYSMD4Q5XG99 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 AC104109.2-201ENST00000602919 1418 ntBASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 AC027601.4-201ENST00000611259 610 ntBASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 AC009154.2-201ENST00000621177 724 ntBASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD4Q5XG99 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 AC021087.4-201ENST00000563761 564 ntBASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 AC145285.3-201ENST00000564603 959 ntBASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 AC011467.2-201ENST00000598425 242 ntBASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 HLA-J-201ENST00000462773 1622 ntBASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD4Q5XG99 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 MED15P5-201ENST00000423150 992 ntBASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 AC005104.2-201ENST00000427818 678 ntBASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 RPS2P1-201ENST00000434010 821 ntBASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 MTCL1P1-201ENST00000446207 792 ntBASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 AL138831.2-201ENST00000606564 490 ntBASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 AL691403.2-201ENST00000618460 490 ntBASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 PCDHAC2-203ENST00000615316 3011 ntBASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 AP005117.1-201ENST00000584346 1413 ntBASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD4Q5XG99 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
LYSMD4Q5XG99 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
LYSMD4Q5XG99 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms