Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 BX323043.1-201ENST00000641006 1765 ntBASIC16.12■□□□□ 0.17
FREM1Q5H8C1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM1Q5H8C1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 BX276092.5-203ENST00000456199 560 ntBASIC16.11■□□□□ 0.17
FREM1Q5H8C1 AC091607.1-201ENST00000490318 1060 ntBASIC16.11■□□□□ 0.17
FREM1Q5H8C1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 AC073592.3-201ENST00000625118 1834 ntBASIC16.11■□□□□ 0.17
FREM1Q5H8C1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM1Q5H8C1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 KRT18P56-201ENST00000507275 550 ntBASIC16.1■□□□□ 0.17
FREM1Q5H8C1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 LINC01126-201ENST00000623515 1646 ntBASIC16.1■□□□□ 0.17
FREM1Q5H8C1 Z83836.1-201ENST00000624605 1642 ntBASIC16.1■□□□□ 0.17
FREM1Q5H8C1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FREM1Q5H8C1 MIR149-201ENST00000384879 89 ntBASIC16.1■□□□□ 0.17
FREM1Q5H8C1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms