Protein–RNA interactions for Protein: Q13133

NR1H3, Oxysterols receptor LXR-alpha, humanhuman

Predictions only

Length 447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3Q13133 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H3Q13133 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H3Q13133 AL512353.2-201ENST00000448759 1962 ntBASIC19.44■□□□□ 0.7
NR1H3Q13133 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.44■□□□□ 0.7
NR1H3Q13133 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H3Q13133 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H3Q13133 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H3Q13133 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.44■□□□□ 0.7
NR1H3Q13133 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H3Q13133 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.43■□□□□ 0.7
NR1H3Q13133 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H3Q13133 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.43■□□□□ 0.7
NR1H3Q13133 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H3Q13133 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H3Q13133 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
NR1H3Q13133 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H3Q13133 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H3Q13133 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H3Q13133 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.43■□□□□ 0.7
NR1H3Q13133 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H3Q13133 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.43■□□□□ 0.7
NR1H3Q13133 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H3Q13133 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H3Q13133 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.43■□□□□ 0.7
NR1H3Q13133 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.43■□□□□ 0.7
NR1H3Q13133 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H3Q13133 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NR1H3Q13133 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.43■□□□□ 0.7
NR1H3Q13133 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H3Q13133 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H3Q13133 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NR1H3Q13133 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H3Q13133 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.42■□□□□ 0.7
NR1H3Q13133 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
NR1H3Q13133 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.42■□□□□ 0.7
NR1H3Q13133 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
NR1H3Q13133 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.42■□□□□ 0.7
NR1H3Q13133 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H3Q13133 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.42■□□□□ 0.7
NR1H3Q13133 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.42■□□□□ 0.7
NR1H3Q13133 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H3Q13133 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
NR1H3Q13133 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H3Q13133 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.42■□□□□ 0.7
NR1H3Q13133 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H3Q13133 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H3Q13133 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.42■□□□□ 0.7
NR1H3Q13133 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H3Q13133 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H3Q13133 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H3Q13133 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H3Q13133 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H3Q13133 KRT18P48-201ENST00000434763 852 ntBASIC19.42■□□□□ 0.7
NR1H3Q13133 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.42■□□□□ 0.7
NR1H3Q13133 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NR1H3Q13133 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.42■□□□□ 0.7
NR1H3Q13133 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.42■□□□□ 0.7
NR1H3Q13133 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.42■□□□□ 0.7
NR1H3Q13133 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.42■□□□□ 0.7
NR1H3Q13133 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.42■□□□□ 0.7
NR1H3Q13133 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NR1H3Q13133 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.42■□□□□ 0.7
NR1H3Q13133 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H3Q13133 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H3Q13133 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H3Q13133 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H3Q13133 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H3Q13133 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.42■□□□□ 0.7
NR1H3Q13133 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H3Q13133 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.42■□□□□ 0.7
NR1H3Q13133 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H3Q13133 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H3Q13133 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H3Q13133 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
NR1H3Q13133 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
NR1H3Q13133 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H3Q13133 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H3Q13133 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NR1H3Q13133 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H3Q13133 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H3Q13133 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H3Q13133 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.41■□□□□ 0.7
NR1H3Q13133 MCCD1P1-208ENST00000445732 328 ntBASIC19.41■□□□□ 0.7
NR1H3Q13133 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.41■□□□□ 0.7
NR1H3Q13133 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.41■□□□□ 0.7
NR1H3Q13133 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.41■□□□□ 0.7
NR1H3Q13133 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
NR1H3Q13133 AC083849.1-201ENST00000615227 514 ntBASIC19.41■□□□□ 0.7
NR1H3Q13133 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.41■□□□□ 0.7
NR1H3Q13133 HYMAI.1-201ENST00000620949 238 ntBASIC19.41■□□□□ 0.7
NR1H3Q13133 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.41■□□□□ 0.7
NR1H3Q13133 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.41■□□□□ 0.7
NR1H3Q13133 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H3Q13133 NOC2LP1-202ENST00000452600 2235 ntBASIC19.41■□□□□ 0.7
NR1H3Q13133 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NR1H3Q13133 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.41■□□□□ 0.7
NR1H3Q13133 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NR1H3Q13133 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H3Q13133 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.41■□□□□ 0.7
NR1H3Q13133 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms