Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNTNAP1P78357 MTDHP3-201ENST00000594186 672 ntBASIC21.84■■□□□ 1.09
CNTNAP1P78357 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CNTNAP1P78357 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNTNAP1P78357 AL032819.2-201ENST00000624543 2162 ntBASIC21.84■■□□□ 1.09
CNTNAP1P78357 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CNTNAP1P78357 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CNTNAP1P78357 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.83■■□□□ 1.09
CNTNAP1P78357 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.83■■□□□ 1.09
CNTNAP1P78357 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.83■■□□□ 1.09
CNTNAP1P78357 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CNTNAP1P78357 AL163051.1-201ENST00000569214 1512 ntBASIC21.83■■□□□ 1.09
CNTNAP1P78357 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CNTNAP1P78357 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CNTNAP1P78357 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CNTNAP1P78357 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.83■■□□□ 1.08
CNTNAP1P78357 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CNTNAP1P78357 AC092910.1-201ENST00000482027 1129 ntBASIC21.83■■□□□ 1.08
CNTNAP1P78357 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.83■■□□□ 1.08
CNTNAP1P78357 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CNTNAP1P78357 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CNTNAP1P78357 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CNTNAP1P78357 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.83■■□□□ 1.08
CNTNAP1P78357 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.82■■□□□ 1.08
CNTNAP1P78357 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNTNAP1P78357 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CNTNAP1P78357 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNTNAP1P78357 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNTNAP1P78357 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNTNAP1P78357 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CNTNAP1P78357 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNTNAP1P78357 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CNTNAP1P78357 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CNTNAP1P78357 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.82■■□□□ 1.08
CNTNAP1P78357 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.82■■□□□ 1.08
CNTNAP1P78357 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
CNTNAP1P78357 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
CNTNAP1P78357 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNTNAP1P78357 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CNTNAP1P78357 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CNTNAP1P78357 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNTNAP1P78357 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNTNAP1P78357 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNTNAP1P78357 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNTNAP1P78357 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNTNAP1P78357 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.81■■□□□ 1.08
CNTNAP1P78357 HLA-J-201ENST00000462773 1622 ntBASIC21.81■■□□□ 1.08
CNTNAP1P78357 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNTNAP1P78357 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNTNAP1P78357 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.81■■□□□ 1.08
CNTNAP1P78357 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNTNAP1P78357 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CNTNAP1P78357 MIR770-201ENST00000390219 98 ntBASIC21.81■■□□□ 1.08
CNTNAP1P78357 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC21.81■■□□□ 1.08
CNTNAP1P78357 AL645939.2-201ENST00000427340 991 ntBASIC21.81■■□□□ 1.08
CNTNAP1P78357 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.81■■□□□ 1.08
CNTNAP1P78357 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC21.81■■□□□ 1.08
CNTNAP1P78357 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CNTNAP1P78357 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CNTNAP1P78357 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.81■■□□□ 1.08
CNTNAP1P78357 MTDHP5-201ENST00000598980 586 ntBASIC21.81■■□□□ 1.08
CNTNAP1P78357 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNTNAP1P78357 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.81■■□□□ 1.08
CNTNAP1P78357 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.81■■□□□ 1.08
CNTNAP1P78357 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
CNTNAP1P78357 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CNTNAP1P78357 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
CNTNAP1P78357 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNTNAP1P78357 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNTNAP1P78357 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CNTNAP1P78357 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC21.8■■□□□ 1.08
CNTNAP1P78357 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNTNAP1P78357 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC21.8■■□□□ 1.08
CNTNAP1P78357 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CNTNAP1P78357 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.8■■□□□ 1.08
CNTNAP1P78357 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.8■■□□□ 1.08
CNTNAP1P78357 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.8■■□□□ 1.08
CNTNAP1P78357 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.8■■□□□ 1.08
CNTNAP1P78357 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CNTNAP1P78357 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CNTNAP1P78357 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.8■■□□□ 1.08
CNTNAP1P78357 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CNTNAP1P78357 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CNTNAP1P78357 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.8■■□□□ 1.08
CNTNAP1P78357 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNTNAP1P78357 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.8■■□□□ 1.08
CNTNAP1P78357 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.8■■□□□ 1.08
CNTNAP1P78357 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.79■■□□□ 1.08
CNTNAP1P78357 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNTNAP1P78357 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.79■■□□□ 1.08
CNTNAP1P78357 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNTNAP1P78357 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.79■■□□□ 1.08
CNTNAP1P78357 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CNTNAP1P78357 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNTNAP1P78357 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.79■■□□□ 1.08
CNTNAP1P78357 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.79■■□□□ 1.08
CNTNAP1P78357 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.79■■□□□ 1.08
CNTNAP1P78357 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNTNAP1P78357 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNTNAP1P78357 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms