Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.26■□□□□ 0.35
TUBA4AP68366 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBA4AP68366 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.26■□□□□ 0.35
TUBA4AP68366 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA4AP68366 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TUBA4AP68366 AC011676.5-201ENST00000624864 2660 ntBASIC17.26■□□□□ 0.35
TUBA4AP68366 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TUBA4AP68366 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
TUBA4AP68366 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBA4AP68366 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA4AP68366 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA4AP68366 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA4AP68366 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA4AP68366 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA4AP68366 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.26■□□□□ 0.35
TUBA4AP68366 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBA4AP68366 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA4AP68366 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBA4AP68366 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA4AP68366 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TUBA4AP68366 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
TUBA4AP68366 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA4AP68366 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.25■□□□□ 0.35
TUBA4AP68366 AC018695.7-201ENST00000624587 2492 ntBASIC17.25■□□□□ 0.35
TUBA4AP68366 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TUBA4AP68366 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.25■□□□□ 0.35
TUBA4AP68366 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TUBA4AP68366 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TUBA4AP68366 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA4AP68366 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.25■□□□□ 0.35
TUBA4AP68366 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA4AP68366 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA4AP68366 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA4AP68366 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.25■□□□□ 0.35
TUBA4AP68366 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.25■□□□□ 0.35
TUBA4AP68366 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TUBA4AP68366 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.25■□□□□ 0.35
TUBA4AP68366 AC124016.1-201ENST00000609552 612 ntBASIC17.25■□□□□ 0.35
TUBA4AP68366 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.25■□□□□ 0.35
TUBA4AP68366 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.25■□□□□ 0.35
TUBA4AP68366 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.25■□□□□ 0.35
TUBA4AP68366 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.25■□□□□ 0.35
TUBA4AP68366 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA4AP68366 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TUBA4AP68366 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA4AP68366 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.25■□□□□ 0.35
TUBA4AP68366 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
TUBA4AP68366 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TUBA4AP68366 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.25■□□□□ 0.35
TUBA4AP68366 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA4AP68366 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA4AP68366 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA4AP68366 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA4AP68366 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TUBA4AP68366 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBA4AP68366 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA4AP68366 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
TUBA4AP68366 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
TUBA4AP68366 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA4AP68366 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TUBA4AP68366 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA4AP68366 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBA4AP68366 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA4AP68366 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA4AP68366 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TUBA4AP68366 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.24■□□□□ 0.35
TUBA4AP68366 AL513477.1-201ENST00000602865 2407 ntBASIC17.24■□□□□ 0.35
TUBA4AP68366 AL391005.1-201ENST00000623953 2435 ntBASIC17.24■□□□□ 0.35
TUBA4AP68366 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA4AP68366 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TUBA4AP68366 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.24■□□□□ 0.35
TUBA4AP68366 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA4AP68366 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.24■□□□□ 0.35
TUBA4AP68366 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.24■□□□□ 0.35
TUBA4AP68366 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TUBA4AP68366 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBA4AP68366 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TUBA4AP68366 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA4AP68366 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA4AP68366 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA4AP68366 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA4AP68366 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA4AP68366 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TUBA4AP68366 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA4AP68366 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA4AP68366 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBA4AP68366 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA4AP68366 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA4AP68366 TFP1-202ENST00000475455 1573 ntBASIC17.23■□□□□ 0.35
TUBA4AP68366 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA4AP68366 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA4AP68366 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA4AP68366 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA4AP68366 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBA4AP68366 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA4AP68366 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA4AP68366 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TUBA4AP68366 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA4AP68366 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TUBA4AP68366 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms