Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 PRELID1P1-202ENST00000567272 903 ntBASIC20.97■□□□□ 0.95
CHMP4BP1P59074 AC092329.2-201ENST00000598402 547 ntBASIC20.97■□□□□ 0.95
CHMP4BP1P59074 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 AL157888.1-201ENST00000631930 593 ntBASIC20.97■□□□□ 0.95
CHMP4BP1P59074 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP4BP1P59074 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 BX276092.5-203ENST00000456199 560 ntBASIC20.96■□□□□ 0.95
CHMP4BP1P59074 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 AC011498.5-201ENST00000592027 486 ntBASIC20.96■□□□□ 0.95
CHMP4BP1P59074 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 AL691432.3-201ENST00000621860 400 ntBASIC20.96■□□□□ 0.95
CHMP4BP1P59074 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 AC104581.1-202ENST00000635932 2618 ntBASIC20.96■□□□□ 0.95
CHMP4BP1P59074 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP4BP1P59074 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 ATP5G2P1-201ENST00000433580 426 ntBASIC20.95■□□□□ 0.94
CHMP4BP1P59074 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 MIR3652-201ENST00000579335 131 ntBASIC20.95■□□□□ 0.94
CHMP4BP1P59074 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 AC112497.1-201ENST00000624824 639 ntBASIC20.95■□□□□ 0.94
CHMP4BP1P59074 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.95■□□□□ 0.94
CHMP4BP1P59074 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms