Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.59■□□□□ 0.41
VSX2P58304 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VSX2P58304 FAM86EP-206ENST00000510506 987 ntBASIC17.59■□□□□ 0.41
VSX2P58304 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.59■□□□□ 0.41
VSX2P58304 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.59■□□□□ 0.41
VSX2P58304 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VSX2P58304 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.59■□□□□ 0.41
VSX2P58304 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VSX2P58304 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VSX2P58304 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.59■□□□□ 0.41
VSX2P58304 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
VSX2P58304 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.59■□□□□ 0.41
VSX2P58304 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VSX2P58304 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VSX2P58304 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VSX2P58304 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VSX2P58304 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VSX2P58304 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VSX2P58304 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
VSX2P58304 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
VSX2P58304 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.58■□□□□ 0.41
VSX2P58304 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VSX2P58304 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VSX2P58304 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VSX2P58304 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
VSX2P58304 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
VSX2P58304 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
VSX2P58304 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VSX2P58304 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.58■□□□□ 0.4
VSX2P58304 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VSX2P58304 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VSX2P58304 PCED1CP-201ENST00000419887 785 ntBASIC17.58■□□□□ 0.4
VSX2P58304 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.58■□□□□ 0.4
VSX2P58304 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VSX2P58304 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.58■□□□□ 0.4
VSX2P58304 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.58■□□□□ 0.4
VSX2P58304 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.58■□□□□ 0.4
VSX2P58304 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.58■□□□□ 0.4
VSX2P58304 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
VSX2P58304 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.58■□□□□ 0.4
VSX2P58304 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.58■□□□□ 0.4
VSX2P58304 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VSX2P58304 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.58■□□□□ 0.4
VSX2P58304 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
VSX2P58304 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
VSX2P58304 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.58■□□□□ 0.4
VSX2P58304 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.58■□□□□ 0.4
VSX2P58304 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VSX2P58304 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VSX2P58304 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
VSX2P58304 TNXA-203ENST00000507684 2038 ntBASIC17.57■□□□□ 0.4
VSX2P58304 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VSX2P58304 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VSX2P58304 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VSX2P58304 AC005332.1-201ENST00000577698 1310 ntBASIC17.57■□□□□ 0.4
VSX2P58304 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VSX2P58304 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
VSX2P58304 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.57■□□□□ 0.4
VSX2P58304 HLA-F-220ENST00000434407 884 ntBASIC17.57■□□□□ 0.4
VSX2P58304 PVRIG2P-201ENST00000435460 978 ntBASIC17.57■□□□□ 0.4
VSX2P58304 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.57■□□□□ 0.4
VSX2P58304 SPDYE13P-201ENST00000445314 798 ntBASIC17.57■□□□□ 0.4
VSX2P58304 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VSX2P58304 AL136038.3-201ENST00000561909 1096 ntBASIC17.57■□□□□ 0.4
VSX2P58304 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.57■□□□□ 0.4
VSX2P58304 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.57■□□□□ 0.4
VSX2P58304 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VSX2P58304 AC005082.1-201ENST00000413042 2259 ntBASIC17.57■□□□□ 0.4
VSX2P58304 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
VSX2P58304 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VSX2P58304 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VSX2P58304 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VSX2P58304 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VSX2P58304 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
VSX2P58304 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
VSX2P58304 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VSX2P58304 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
VSX2P58304 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VSX2P58304 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VSX2P58304 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.56■□□□□ 0.4
VSX2P58304 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.56■□□□□ 0.4
VSX2P58304 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VSX2P58304 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.56■□□□□ 0.4
VSX2P58304 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VSX2P58304 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
VSX2P58304 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VSX2P58304 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.56■□□□□ 0.4
VSX2P58304 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.56■□□□□ 0.4
VSX2P58304 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VSX2P58304 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
VSX2P58304 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VSX2P58304 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VSX2P58304 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VSX2P58304 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.56■□□□□ 0.4
VSX2P58304 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VSX2P58304 AC091076.1-201ENST00000610741 619 ntBASIC17.56■□□□□ 0.4
VSX2P58304 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.56■□□□□ 0.4
VSX2P58304 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VSX2P58304 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
VSX2P58304 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms