Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN20P56880 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CLDN20P56880 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN20P56880 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN20P56880 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN20P56880 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN20P56880 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CLDN20P56880 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN20P56880 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CLDN20P56880 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN20P56880 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN20P56880 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
CLDN20P56880 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN20P56880 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN20P56880 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
CLDN20P56880 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN20P56880 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
CLDN20P56880 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN20P56880 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN20P56880 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN20P56880 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN20P56880 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.85■□□□□ 0.29
CLDN20P56880 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN20P56880 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN20P56880 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.85■□□□□ 0.29
CLDN20P56880 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN20P56880 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN20P56880 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.85■□□□□ 0.29
CLDN20P56880 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.85■□□□□ 0.29
CLDN20P56880 AK4P3-201ENST00000418260 669 ntBASIC16.85■□□□□ 0.29
CLDN20P56880 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN20P56880 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN20P56880 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN20P56880 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN20P56880 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN20P56880 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.85■□□□□ 0.29
CLDN20P56880 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.85■□□□□ 0.29
CLDN20P56880 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CLDN20P56880 AL049597.2-201ENST00000565575 961 ntBASIC16.85■□□□□ 0.29
CLDN20P56880 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN20P56880 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN20P56880 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN20P56880 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN20P56880 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN20P56880 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN20P56880 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN20P56880 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN20P56880 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN20P56880 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN20P56880 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN20P56880 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLDN20P56880 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN20P56880 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN20P56880 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN20P56880 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN20P56880 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN20P56880 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN20P56880 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLDN20P56880 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN20P56880 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN20P56880 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN20P56880 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN20P56880 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLDN20P56880 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CLDN20P56880 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CLDN20P56880 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN20P56880 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.84■□□□□ 0.29
CLDN20P56880 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN20P56880 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.84■□□□□ 0.29
CLDN20P56880 AC011558.1-201ENST00000623459 338 ntBASIC16.84■□□□□ 0.29
CLDN20P56880 AC068587.9-201ENST00000641814 219 ntBASIC16.84■□□□□ 0.29
CLDN20P56880 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN20P56880 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLDN20P56880 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN20P56880 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN20P56880 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN20P56880 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN20P56880 AL031598.1-201ENST00000561511 1773 ntBASIC16.84■□□□□ 0.29
CLDN20P56880 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN20P56880 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN20P56880 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
CLDN20P56880 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN20P56880 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN20P56880 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN20P56880 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN20P56880 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN20P56880 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLDN20P56880 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLDN20P56880 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN20P56880 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN20P56880 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN20P56880 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.83■□□□□ 0.28
CLDN20P56880 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN20P56880 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.83■□□□□ 0.28
CLDN20P56880 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN20P56880 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN20P56880 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN20P56880 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN20P56880 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN20P56880 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms