Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMC4P56277 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.7□□□□□ -0.22
CMC4P56277 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CMC4P56277 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CMC4P56277 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMC4P56277 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMC4P56277 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CMC4P56277 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.7□□□□□ -0.22
CMC4P56277 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMC4P56277 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CMC4P56277 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMC4P56277 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMC4P56277 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMC4P56277 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMC4P56277 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CMC4P56277 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMC4P56277 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CMC4P56277 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CMC4P56277 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CMC4P56277 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMC4P56277 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMC4P56277 KRT89P-201ENST00000620027 1478 ntBASIC13.69□□□□□ -0.22
CMC4P56277 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMC4P56277 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMC4P56277 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMC4P56277 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CMC4P56277 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CMC4P56277 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.69□□□□□ -0.22
CMC4P56277 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.69□□□□□ -0.22
CMC4P56277 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.69□□□□□ -0.22
CMC4P56277 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CMC4P56277 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.69□□□□□ -0.22
CMC4P56277 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
CMC4P56277 AL157888.1-201ENST00000631930 593 ntBASIC13.69□□□□□ -0.22
CMC4P56277 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CMC4P56277 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CMC4P56277 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC13.69□□□□□ -0.22
CMC4P56277 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMC4P56277 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CMC4P56277 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CMC4P56277 AC073592.3-201ENST00000625118 1834 ntBASIC13.69□□□□□ -0.22
CMC4P56277 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.69□□□□□ -0.22
CMC4P56277 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CMC4P56277 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CMC4P56277 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMC4P56277 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMC4P56277 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMC4P56277 CROCCP3-202ENST00000420820 1947 ntBASIC13.68□□□□□ -0.22
CMC4P56277 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMC4P56277 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.68□□□□□ -0.22
CMC4P56277 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMC4P56277 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC13.68□□□□□ -0.22
CMC4P56277 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMC4P56277 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CMC4P56277 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.68□□□□□ -0.22
CMC4P56277 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMC4P56277 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CMC4P56277 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CMC4P56277 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMC4P56277 MIR1224-201ENST00000408193 85 ntBASIC13.68□□□□□ -0.22
CMC4P56277 KRT18P48-201ENST00000434763 852 ntBASIC13.68□□□□□ -0.22
CMC4P56277 AL671277.2-201ENST00000458060 996 ntBASIC13.68□□□□□ -0.22
CMC4P56277 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
CMC4P56277 AC024563.2-201ENST00000603282 481 ntBASIC13.68□□□□□ -0.22
CMC4P56277 AL136038.4-201ENST00000603606 1261 ntBASIC13.68□□□□□ -0.22
CMC4P56277 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.68□□□□□ -0.22
CMC4P56277 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMC4P56277 AP000974.1-201ENST00000623909 2387 ntBASIC13.68□□□□□ -0.22
CMC4P56277 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMC4P56277 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMC4P56277 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CMC4P56277 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMC4P56277 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMC4P56277 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC13.68□□□□□ -0.22
CMC4P56277 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CMC4P56277 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CMC4P56277 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CMC4P56277 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
CMC4P56277 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CMC4P56277 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.68□□□□□ -0.22
CMC4P56277 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
CMC4P56277 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMC4P56277 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.67□□□□□ -0.22
CMC4P56277 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMC4P56277 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.67□□□□□ -0.22
CMC4P56277 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.67□□□□□ -0.22
CMC4P56277 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CMC4P56277 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.67□□□□□ -0.22
CMC4P56277 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CMC4P56277 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CMC4P56277 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CMC4P56277 GMCL1P1-201ENST00000463439 1581 ntBASIC13.67□□□□□ -0.22
CMC4P56277 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMC4P56277 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC13.67□□□□□ -0.22
CMC4P56277 LINC01311-201ENST00000565162 1445 ntBASIC13.67□□□□□ -0.22
CMC4P56277 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CMC4P56277 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMC4P56277 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CMC4P56277 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMC4P56277 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms