Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF9P41273 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
TNFSF9P41273 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF9P41273 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.85■□□□□ 0.77
TNFSF9P41273 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF9P41273 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF9P41273 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF9P41273 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.85■□□□□ 0.77
TNFSF9P41273 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF9P41273 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TNFSF9P41273 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
TNFSF9P41273 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF9P41273 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.85■□□□□ 0.77
TNFSF9P41273 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.85■□□□□ 0.77
TNFSF9P41273 AC093458.2-201ENST00000623150 629 ntBASIC19.85■□□□□ 0.77
TNFSF9P41273 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF9P41273 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.85■□□□□ 0.77
TNFSF9P41273 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TNFSF9P41273 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.85■□□□□ 0.77
TNFSF9P41273 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF9P41273 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF9P41273 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF9P41273 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF9P41273 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF9P41273 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF9P41273 ESPNP-201ENST00000270691 2015 ntBASIC19.85■□□□□ 0.77
TNFSF9P41273 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF9P41273 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF9P41273 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TNFSF9P41273 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TNFSF9P41273 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TNFSF9P41273 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.84■□□□□ 0.77
TNFSF9P41273 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF9P41273 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.84■□□□□ 0.77
TNFSF9P41273 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF9P41273 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF9P41273 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TNFSF9P41273 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF9P41273 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TNFSF9P41273 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF9P41273 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF9P41273 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.84■□□□□ 0.77
TNFSF9P41273 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.84■□□□□ 0.77
TNFSF9P41273 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF9P41273 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF9P41273 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF9P41273 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.84■□□□□ 0.77
TNFSF9P41273 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF9P41273 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.84■□□□□ 0.77
TNFSF9P41273 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.84■□□□□ 0.77
TNFSF9P41273 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF9P41273 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TNFSF9P41273 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.84■□□□□ 0.77
TNFSF9P41273 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.84■□□□□ 0.77
TNFSF9P41273 AC009113.1-201ENST00000570267 2443 ntBASIC19.84■□□□□ 0.77
TNFSF9P41273 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.84■□□□□ 0.77
TNFSF9P41273 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF9P41273 AC016734.2-201ENST00000624325 1377 ntBASIC19.83■□□□□ 0.77
TNFSF9P41273 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF9P41273 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF9P41273 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF9P41273 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF9P41273 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF9P41273 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF9P41273 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.83■□□□□ 0.77
TNFSF9P41273 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF9P41273 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF9P41273 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
TNFSF9P41273 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF9P41273 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF9P41273 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.83■□□□□ 0.77
TNFSF9P41273 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TNFSF9P41273 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF9P41273 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF9P41273 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF9P41273 IGHGP-201ENST00000390555 1178 ntBASIC19.83■□□□□ 0.77
TNFSF9P41273 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF9P41273 TSPY22P-201ENST00000427496 604 ntBASIC19.83■□□□□ 0.77
TNFSF9P41273 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.83■□□□□ 0.77
TNFSF9P41273 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.83■□□□□ 0.77
TNFSF9P41273 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.83■□□□□ 0.77
TNFSF9P41273 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.83■□□□□ 0.77
TNFSF9P41273 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.83■□□□□ 0.77
TNFSF9P41273 AL390719.2-201ENST00000606993 987 ntBASIC19.83■□□□□ 0.77
TNFSF9P41273 AL020996.1-203ENST00000536896 2307 ntBASIC19.83■□□□□ 0.76
TNFSF9P41273 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF9P41273 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF9P41273 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF9P41273 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
TNFSF9P41273 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TNFSF9P41273 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.83■□□□□ 0.76
TNFSF9P41273 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF9P41273 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF9P41273 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF9P41273 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF9P41273 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF9P41273 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.83■□□□□ 0.76
TNFSF9P41273 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF9P41273 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF9P41273 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms