Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
COL15A1P39059 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
COL15A1P39059 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC23.25■■□□□ 1.31
COL15A1P39059 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
COL15A1P39059 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC23.25■■□□□ 1.31
COL15A1P39059 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC23.25■■□□□ 1.31
COL15A1P39059 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL15A1P39059 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
COL15A1P39059 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC23.25■■□□□ 1.31
COL15A1P39059 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC23.25■■□□□ 1.31
COL15A1P39059 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC23.25■■□□□ 1.31
COL15A1P39059 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC23.25■■□□□ 1.31
COL15A1P39059 AL049840.3-201ENST00000602669 611 ntBASIC23.25■■□□□ 1.31
COL15A1P39059 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
COL15A1P39059 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC23.25■■□□□ 1.31
COL15A1P39059 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC23.25■■□□□ 1.31
COL15A1P39059 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL15A1P39059 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL15A1P39059 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL15A1P39059 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL15A1P39059 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL15A1P39059 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
COL15A1P39059 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
COL15A1P39059 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL15A1P39059 UROS-202ENST00000368778 1556 ntTSL 2 BASIC23.24■■□□□ 1.31
COL15A1P39059 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL15A1P39059 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL15A1P39059 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL15A1P39059 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC23.24■■□□□ 1.31
COL15A1P39059 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
COL15A1P39059 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC23.24■■□□□ 1.31
COL15A1P39059 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL15A1P39059 KRT18P58-201ENST00000527480 1120 ntBASIC23.24■■□□□ 1.31
COL15A1P39059 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC23.24■■□□□ 1.31
COL15A1P39059 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
COL15A1P39059 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL15A1P39059 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC23.23■■□□□ 1.31
COL15A1P39059 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC23.23■■□□□ 1.31
COL15A1P39059 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC23.23■■□□□ 1.31
COL15A1P39059 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
COL15A1P39059 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL15A1P39059 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
COL15A1P39059 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL15A1P39059 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL15A1P39059 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC23.23■■□□□ 1.31
COL15A1P39059 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL15A1P39059 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL15A1P39059 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL15A1P39059 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC23.23■■□□□ 1.31
COL15A1P39059 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL15A1P39059 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL15A1P39059 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL15A1P39059 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC23.22■■□□□ 1.31
COL15A1P39059 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC23.22■■□□□ 1.31
COL15A1P39059 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL15A1P39059 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
COL15A1P39059 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COL15A1P39059 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL15A1P39059 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC23.22■■□□□ 1.31
COL15A1P39059 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL15A1P39059 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC23.22■■□□□ 1.31
COL15A1P39059 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC23.22■■□□□ 1.31
COL15A1P39059 AC132008.2-207ENST00000454517 770 ntBASIC23.22■■□□□ 1.31
COL15A1P39059 FGFR3P6-201ENST00000457012 610 ntBASIC23.22■■□□□ 1.31
COL15A1P39059 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC23.22■■□□□ 1.31
COL15A1P39059 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL15A1P39059 AL355877.3-201ENST00000622820 899 ntBASIC23.22■■□□□ 1.31
COL15A1P39059 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.22■■□□□ 1.31
COL15A1P39059 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL15A1P39059 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL15A1P39059 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC23.22■■□□□ 1.31
COL15A1P39059 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COL15A1P39059 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL15A1P39059 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL15A1P39059 NARF-204ENST00000390006 1766 ntTSL 2 BASIC23.21■■□□□ 1.31
COL15A1P39059 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL15A1P39059 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL15A1P39059 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL15A1P39059 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
COL15A1P39059 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL15A1P39059 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL15A1P39059 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
COL15A1P39059 RCN1P2-201ENST00000398357 915 ntBASIC23.21■■□□□ 1.31
COL15A1P39059 RNPS1P1-201ENST00000507437 918 ntBASIC23.21■■□□□ 1.31
COL15A1P39059 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC23.21■■□□□ 1.31
COL15A1P39059 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL15A1P39059 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
COL15A1P39059 AC106730.1-201ENST00000566722 1090 ntBASIC23.21■■□□□ 1.31
COL15A1P39059 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC23.21■■□□□ 1.31
COL15A1P39059 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL15A1P39059 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL15A1P39059 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC23.21■■□□□ 1.31
COL15A1P39059 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL15A1P39059 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.31
COL15A1P39059 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
COL15A1P39059 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC23.2■■□□□ 1.31
COL15A1P39059 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
COL15A1P39059 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL15A1P39059 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL15A1P39059 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms