Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.04■■□□□ 1.28
RFC4P35249 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
RFC4P35249 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFC4P35249 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RFC4P35249 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFC4P35249 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.04■■□□□ 1.28
RFC4P35249 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC23.04■■□□□ 1.28
RFC4P35249 KRT18P3-201ENST00000451602 1288 ntBASIC23.04■■□□□ 1.28
RFC4P35249 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC23.04■■□□□ 1.28
RFC4P35249 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC23.04■■□□□ 1.28
RFC4P35249 Z83851.2-201ENST00000609564 659 ntBASIC23.04■■□□□ 1.28
RFC4P35249 AC009154.2-201ENST00000621177 724 ntBASIC23.04■■□□□ 1.28
RFC4P35249 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
RFC4P35249 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC23.04■■□□□ 1.28
RFC4P35249 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC23.04■■□□□ 1.28
RFC4P35249 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RFC4P35249 AL356309.3-201ENST00000624132 1934 ntBASIC23.04■■□□□ 1.28
RFC4P35249 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC23.03■■□□□ 1.28
RFC4P35249 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
RFC4P35249 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFC4P35249 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFC4P35249 AC125634.1-201ENST00000438758 1403 ntBASIC23.03■■□□□ 1.28
RFC4P35249 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFC4P35249 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
RFC4P35249 RAB17-203ENST00000409576 466 ntTSL 3 BASIC23.03■■□□□ 1.28
RFC4P35249 IMP4-203ENST00000409935 958 ntTSL 5 BASIC23.03■■□□□ 1.28
RFC4P35249 GPX1P2-201ENST00000429271 606 ntBASIC23.03■■□□□ 1.28
RFC4P35249 RNA5SP415-201ENST00000517246 115 ntBASIC23.03■■□□□ 1.28
RFC4P35249 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFC4P35249 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFC4P35249 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.03■■□□□ 1.28
RFC4P35249 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RFC4P35249 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFC4P35249 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFC4P35249 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
RFC4P35249 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RFC4P35249 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RFC4P35249 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RFC4P35249 PMS2P2-201ENST00000425039 1128 ntBASIC23.02■■□□□ 1.28
RFC4P35249 RPS8P6-201ENST00000426177 609 ntBASIC23.02■■□□□ 1.28
RFC4P35249 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC23.02■■□□□ 1.28
RFC4P35249 MIR3687-2-201ENST00000577708 61 ntBASIC23.02■■□□□ 1.28
RFC4P35249 AP001160.2-201ENST00000596071 487 ntBASIC23.02■■□□□ 1.28
RFC4P35249 MIR3687-1-201ENST00000614492 61 ntBASIC23.02■■□□□ 1.28
RFC4P35249 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC23.02■■□□□ 1.28
RFC4P35249 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
RFC4P35249 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
RFC4P35249 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RFC4P35249 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RFC4P35249 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RFC4P35249 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RFC4P35249 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RFC4P35249 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RFC4P35249 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.27
RFC4P35249 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.01■■□□□ 1.27
RFC4P35249 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFC4P35249 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFC4P35249 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RFC4P35249 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
RFC4P35249 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFC4P35249 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFC4P35249 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
RFC4P35249 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFC4P35249 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RFC4P35249 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC23.01■■□□□ 1.27
RFC4P35249 AL355385.1-201ENST00000606123 409 ntBASIC23.01■■□□□ 1.27
RFC4P35249 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFC4P35249 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC23.01■■□□□ 1.27
RFC4P35249 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RFC4P35249 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFC4P35249 PCDHAC2-203ENST00000615316 3011 ntBASIC23.01■■□□□ 1.27
RFC4P35249 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFC4P35249 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFC4P35249 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC23.01■■□□□ 1.27
RFC4P35249 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFC4P35249 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RFC4P35249 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
RFC4P35249 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.01■■□□□ 1.27
RFC4P35249 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC23■■□□□ 1.27
RFC4P35249 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
RFC4P35249 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC23■■□□□ 1.27
RFC4P35249 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RFC4P35249 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC23■■□□□ 1.27
RFC4P35249 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RFC4P35249 INIP-202ENST00000374236 874 ntTSL 2 BASIC23■■□□□ 1.27
RFC4P35249 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC23■■□□□ 1.27
RFC4P35249 YBX2P1-201ENST00000394192 760 ntBASIC23■■□□□ 1.27
RFC4P35249 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC23■■□□□ 1.27
RFC4P35249 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC23■■□□□ 1.27
RFC4P35249 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC23■■□□□ 1.27
RFC4P35249 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC23■■□□□ 1.27
RFC4P35249 AC112482.1-201ENST00000492080 688 ntBASIC23■■□□□ 1.27
RFC4P35249 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC23■■□□□ 1.27
RFC4P35249 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC23■■□□□ 1.27
RFC4P35249 AC025062.2-201ENST00000605477 670 ntBASIC23■■□□□ 1.27
RFC4P35249 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
RFC4P35249 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC23■■□□□ 1.27
RFC4P35249 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC23■■□□□ 1.27
RFC4P35249 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RFC4P35249 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms