Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.02■□□□□ 0.8
HOXC8P31273 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HOXC8P31273 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HOXC8P31273 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HOXC8P31273 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.02■□□□□ 0.79
HOXC8P31273 IL9RP2-201ENST00000423948 1312 ntBASIC20.02■□□□□ 0.79
HOXC8P31273 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HOXC8P31273 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXC8P31273 AC116562.4-201ENST00000641316 2276 ntBASIC20.01■□□□□ 0.79
HOXC8P31273 LINC00602-201ENST00000629776 2065 ntBASIC20.01■□□□□ 0.79
HOXC8P31273 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.01■□□□□ 0.79
HOXC8P31273 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXC8P31273 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HOXC8P31273 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXC8P31273 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.01■□□□□ 0.79
HOXC8P31273 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXC8P31273 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
HOXC8P31273 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXC8P31273 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXC8P31273 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HOXC8P31273 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.01■□□□□ 0.79
HOXC8P31273 AP001269.4-201ENST00000609611 512 ntBASIC20.01■□□□□ 0.79
HOXC8P31273 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HOXC8P31273 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HOXC8P31273 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXC8P31273 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HOXC8P31273 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
HOXC8P31273 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HOXC8P31273 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
HOXC8P31273 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HOXC8P31273 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
HOXC8P31273 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20■□□□□ 0.79
HOXC8P31273 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HOXC8P31273 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HOXC8P31273 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20■□□□□ 0.79
HOXC8P31273 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HOXC8P31273 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HOXC8P31273 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20■□□□□ 0.79
HOXC8P31273 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20■□□□□ 0.79
HOXC8P31273 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20■□□□□ 0.79
HOXC8P31273 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20■□□□□ 0.79
HOXC8P31273 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20■□□□□ 0.79
HOXC8P31273 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20■□□□□ 0.79
HOXC8P31273 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
HOXC8P31273 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
HOXC8P31273 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC8P31273 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.99■□□□□ 0.79
HOXC8P31273 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC8P31273 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC8P31273 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC8P31273 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC8P31273 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC8P31273 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
HOXC8P31273 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC8P31273 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HOXC8P31273 AF186996.4-201ENST00000467186 377 ntBASIC19.99■□□□□ 0.79
HOXC8P31273 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.99■□□□□ 0.79
HOXC8P31273 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.99■□□□□ 0.79
HOXC8P31273 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.99■□□□□ 0.79
HOXC8P31273 MIR7706-201ENST00000613747 67 ntBASIC19.99■□□□□ 0.79
HOXC8P31273 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.99■□□□□ 0.79
HOXC8P31273 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.99■□□□□ 0.79
HOXC8P31273 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC8P31273 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.99■□□□□ 0.79
HOXC8P31273 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.99■□□□□ 0.79
HOXC8P31273 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC8P31273 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
HOXC8P31273 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.99■□□□□ 0.79
HOXC8P31273 AC243591.1-201ENST00000452967 1364 ntBASIC19.98■□□□□ 0.79
HOXC8P31273 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC8P31273 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC8P31273 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC8P31273 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.98■□□□□ 0.79
HOXC8P31273 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC8P31273 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC8P31273 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.98■□□□□ 0.79
HOXC8P31273 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.98■□□□□ 0.79
HOXC8P31273 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.98■□□□□ 0.79
HOXC8P31273 SLC25A1P1-201ENST00000528351 927 ntBASIC19.98■□□□□ 0.79
HOXC8P31273 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.98■□□□□ 0.79
HOXC8P31273 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.98■□□□□ 0.79
HOXC8P31273 AC006538.3-201ENST00000612495 578 ntBASIC19.98■□□□□ 0.79
HOXC8P31273 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.98■□□□□ 0.79
HOXC8P31273 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC8P31273 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC8P31273 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.98■□□□□ 0.79
HOXC8P31273 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC8P31273 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC8P31273 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HOXC8P31273 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.98■□□□□ 0.79
HOXC8P31273 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC8P31273 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC8P31273 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC8P31273 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC8P31273 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.97■□□□□ 0.79
HOXC8P31273 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.97■□□□□ 0.79
HOXC8P31273 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC8P31273 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC8P31273 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HOXC8P31273 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms