Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MMP8P22894 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
MMP8P22894 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
MMP8P22894 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MMP8P22894 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
MMP8P22894 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MMP8P22894 AC113347.1-201ENST00000413321 391 ntBASIC19.33■□□□□ 0.68
MMP8P22894 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.33■□□□□ 0.68
MMP8P22894 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.33■□□□□ 0.68
MMP8P22894 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.33■□□□□ 0.68
MMP8P22894 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.33■□□□□ 0.68
MMP8P22894 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
MMP8P22894 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.33■□□□□ 0.68
MMP8P22894 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MMP8P22894 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
MMP8P22894 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.33■□□□□ 0.68
MMP8P22894 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.33■□□□□ 0.68
MMP8P22894 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
MMP8P22894 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.33■□□□□ 0.68
MMP8P22894 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MMP8P22894 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MMP8P22894 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.33■□□□□ 0.68
MMP8P22894 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MMP8P22894 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.32■□□□□ 0.68
MMP8P22894 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MMP8P22894 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP8P22894 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP8P22894 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
MMP8P22894 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.32■□□□□ 0.68
MMP8P22894 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
MMP8P22894 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
MMP8P22894 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
MMP8P22894 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP8P22894 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.32■□□□□ 0.68
MMP8P22894 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.32■□□□□ 0.68
MMP8P22894 GCSHP2-201ENST00000560971 527 ntBASIC19.32■□□□□ 0.68
MMP8P22894 AC005363.2-201ENST00000618631 242 ntBASIC19.32■□□□□ 0.68
MMP8P22894 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MMP8P22894 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
MMP8P22894 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP8P22894 AC073508.3-201ENST00000619697 1419 ntBASIC19.32■□□□□ 0.68
MMP8P22894 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP8P22894 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.32■□□□□ 0.68
MMP8P22894 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP8P22894 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
MMP8P22894 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP8P22894 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP8P22894 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MMP8P22894 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
MMP8P22894 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP8P22894 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.31■□□□□ 0.68
MMP8P22894 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
MMP8P22894 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
MMP8P22894 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP8P22894 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP8P22894 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP8P22894 AC138028.4-201ENST00000564984 1845 ntBASIC19.31■□□□□ 0.68
MMP8P22894 TERF1P1-201ENST00000311003 1181 ntBASIC19.31■□□□□ 0.68
MMP8P22894 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP8P22894 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MMP8P22894 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.31■□□□□ 0.68
MMP8P22894 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP8P22894 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.31■□□□□ 0.68
MMP8P22894 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.31■□□□□ 0.68
MMP8P22894 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.31■□□□□ 0.68
MMP8P22894 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP8P22894 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
MMP8P22894 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
MMP8P22894 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP8P22894 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MMP8P22894 NOC2LP2-201ENST00000407594 1944 ntBASIC19.31■□□□□ 0.68
MMP8P22894 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.31■□□□□ 0.68
MMP8P22894 AC018470.1-201ENST00000624790 3129 ntBASIC19.31■□□□□ 0.68
MMP8P22894 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.31■□□□□ 0.68
MMP8P22894 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP8P22894 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP8P22894 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MMP8P22894 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.3■□□□□ 0.68
MMP8P22894 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP8P22894 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.3■□□□□ 0.68
MMP8P22894 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP8P22894 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP8P22894 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
MMP8P22894 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.3■□□□□ 0.68
MMP8P22894 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.3■□□□□ 0.68
MMP8P22894 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MMP8P22894 AC020763.4-201ENST00000623414 4170 ntBASIC19.3■□□□□ 0.68
MMP8P22894 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP8P22894 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP8P22894 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MMP8P22894 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP8P22894 LIN28AP1-201ENST00000429574 405 ntBASIC19.3■□□□□ 0.68
MMP8P22894 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP8P22894 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.3■□□□□ 0.68
MMP8P22894 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.3■□□□□ 0.68
MMP8P22894 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.3■□□□□ 0.68
MMP8P22894 AL157888.1-201ENST00000631930 593 ntBASIC19.3■□□□□ 0.68
MMP8P22894 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MMP8P22894 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MMP8P22894 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms