Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MSR1P21757 AL390961.4-201ENST00000623958 2535 ntBASIC16.25■□□□□ 0.19
MSR1P21757 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MSR1P21757 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSR1P21757 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MSR1P21757 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
MSR1P21757 AL354751.1-201ENST00000412768 1863 ntBASIC16.25■□□□□ 0.19
MSR1P21757 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MSR1P21757 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
MSR1P21757 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSR1P21757 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
MSR1P21757 HMGA1P5-201ENST00000412453 271 ntBASIC16.25■□□□□ 0.19
MSR1P21757 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.25■□□□□ 0.19
MSR1P21757 AC009065.1-201ENST00000564055 1225 ntBASIC16.25■□□□□ 0.19
MSR1P21757 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
MSR1P21757 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.25■□□□□ 0.19
MSR1P21757 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.25■□□□□ 0.19
MSR1P21757 AC112497.1-201ENST00000624824 639 ntBASIC16.25■□□□□ 0.19
MSR1P21757 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.25■□□□□ 0.19
MSR1P21757 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSR1P21757 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.25■□□□□ 0.19
MSR1P21757 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.25■□□□□ 0.19
MSR1P21757 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSR1P21757 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSR1P21757 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MSR1P21757 PKD1P1-201ENST00000458669 6805 ntBASIC16.25■□□□□ 0.19
MSR1P21757 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSR1P21757 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSR1P21757 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSR1P21757 LINC01568-207ENST00000641790 1380 ntBASIC16.25■□□□□ 0.19
MSR1P21757 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
MSR1P21757 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
MSR1P21757 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.24■□□□□ 0.19
MSR1P21757 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSR1P21757 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSR1P21757 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSR1P21757 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.24■□□□□ 0.19
MSR1P21757 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
MSR1P21757 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSR1P21757 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSR1P21757 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.24■□□□□ 0.19
MSR1P21757 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
MSR1P21757 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSR1P21757 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSR1P21757 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSR1P21757 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MSR1P21757 ABALON-201ENST00000629058 1903 ntBASIC16.24■□□□□ 0.19
MSR1P21757 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSR1P21757 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
MSR1P21757 ECEL1P2-202ENST00000465689 757 ntBASIC16.24■□□□□ 0.19
MSR1P21757 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.24■□□□□ 0.19
MSR1P21757 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.24■□□□□ 0.19
MSR1P21757 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.24■□□□□ 0.19
MSR1P21757 FAM87A-204ENST00000613235 858 ntBASIC16.24■□□□□ 0.19
MSR1P21757 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MSR1P21757 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSR1P21757 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSR1P21757 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MSR1P21757 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.24■□□□□ 0.19
MSR1P21757 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.24■□□□□ 0.19
MSR1P21757 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.24■□□□□ 0.19
MSR1P21757 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
MSR1P21757 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSR1P21757 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSR1P21757 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MSR1P21757 AL163051.1-201ENST00000569214 1512 ntBASIC16.24■□□□□ 0.19
MSR1P21757 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
MSR1P21757 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
MSR1P21757 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MSR1P21757 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
MSR1P21757 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MSR1P21757 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MSR1P21757 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.23■□□□□ 0.19
MSR1P21757 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
MSR1P21757 KRT18P22-201ENST00000402024 1347 ntBASIC16.23■□□□□ 0.19
MSR1P21757 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MSR1P21757 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
MSR1P21757 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MSR1P21757 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.23■□□□□ 0.19
MSR1P21757 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
MSR1P21757 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
MSR1P21757 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.23■□□□□ 0.19
MSR1P21757 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MSR1P21757 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MSR1P21757 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MSR1P21757 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.23■□□□□ 0.19
MSR1P21757 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.23■□□□□ 0.19
MSR1P21757 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
MSR1P21757 MIR149-201ENST00000384879 89 ntBASIC16.23■□□□□ 0.19
MSR1P21757 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.23■□□□□ 0.19
MSR1P21757 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.23■□□□□ 0.19
MSR1P21757 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.23■□□□□ 0.19
MSR1P21757 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MSR1P21757 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.23■□□□□ 0.19
MSR1P21757 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.23■□□□□ 0.19
MSR1P21757 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.23■□□□□ 0.19
MSR1P21757 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.23■□□□□ 0.19
MSR1P21757 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MSR1P21757 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
MSR1P21757 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms