Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.43■□□□□ 0.7
PTPN1P18031 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.43■□□□□ 0.7
PTPN1P18031 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN1P18031 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PTPN1P18031 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.43■□□□□ 0.7
PTPN1P18031 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN1P18031 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
PTPN1P18031 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.43■□□□□ 0.7
PTPN1P18031 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.43■□□□□ 0.7
PTPN1P18031 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PTPN1P18031 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN1P18031 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN1P18031 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.43■□□□□ 0.7
PTPN1P18031 AL024508.2-201ENST00000607749 1894 ntBASIC19.43■□□□□ 0.7
PTPN1P18031 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN1P18031 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN1P18031 AC004408.2-201ENST00000623613 2777 ntBASIC19.43■□□□□ 0.7
PTPN1P18031 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PTPN1P18031 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 KRT89P-201ENST00000620027 1478 ntBASIC19.42■□□□□ 0.7
PTPN1P18031 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPN1P18031 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.42■□□□□ 0.7
PTPN1P18031 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPN1P18031 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
PTPN1P18031 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PTPN1P18031 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPN1P18031 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPN1P18031 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.42■□□□□ 0.7
PTPN1P18031 AC005332.3-201ENST00000589904 676 ntBASIC19.42■□□□□ 0.7
PTPN1P18031 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PTPN1P18031 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.42■□□□□ 0.7
PTPN1P18031 WIZP1-201ENST00000531444 2299 ntBASIC19.42■□□□□ 0.7
PTPN1P18031 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PTPN1P18031 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN1P18031 AC073592.3-201ENST00000625118 1834 ntBASIC19.41■□□□□ 0.7
PTPN1P18031 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN1P18031 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPN1P18031 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN1P18031 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPN1P18031 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPN1P18031 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN1P18031 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
PTPN1P18031 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PTPN1P18031 Z83836.1-201ENST00000624605 1642 ntBASIC19.41■□□□□ 0.7
PTPN1P18031 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN1P18031 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPN1P18031 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN1P18031 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPN1P18031 TSPY22P-201ENST00000427496 604 ntBASIC19.41■□□□□ 0.7
PTPN1P18031 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN1P18031 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.41■□□□□ 0.7
PTPN1P18031 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN1P18031 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPN1P18031 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPN1P18031 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.41■□□□□ 0.7
PTPN1P18031 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN1P18031 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN1P18031 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN1P18031 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN1P18031 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN1P18031 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN1P18031 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PTPN1P18031 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PTPN1P18031 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPN1P18031 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN1P18031 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPN1P18031 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN1P18031 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PTPN1P18031 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN1P18031 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN1P18031 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN1P18031 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN1P18031 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PTPN1P18031 AL138781.2-201ENST00000617896 1843 ntBASIC19.4■□□□□ 0.7
PTPN1P18031 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PTPN1P18031 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPN1P18031 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PTPN1P18031 IGHGP-201ENST00000390555 1178 ntBASIC19.4■□□□□ 0.7
PTPN1P18031 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN1P18031 BX276092.5-203ENST00000456199 560 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms