Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 AC009102.3-201ENST00000623118 1491 ntBASIC19.17■□□□□ 0.66
TCF4P15884 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCF4P15884 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCF4P15884 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TCF4P15884 AC008764.6-201ENST00000595909 2069 ntBASIC19.17■□□□□ 0.66
TCF4P15884 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCF4P15884 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCF4P15884 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.17■□□□□ 0.66
TCF4P15884 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.17■□□□□ 0.66
TCF4P15884 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TCF4P15884 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCF4P15884 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.17■□□□□ 0.66
TCF4P15884 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.17■□□□□ 0.66
TCF4P15884 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.17■□□□□ 0.66
TCF4P15884 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.17■□□□□ 0.66
TCF4P15884 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TCF4P15884 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCF4P15884 GMCL1P1-201ENST00000463439 1581 ntBASIC19.17■□□□□ 0.66
TCF4P15884 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCF4P15884 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCF4P15884 LINC01126-201ENST00000623515 1646 ntBASIC19.17■□□□□ 0.66
TCF4P15884 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.17■□□□□ 0.66
TCF4P15884 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
TCF4P15884 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TCF4P15884 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCF4P15884 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCF4P15884 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TCF4P15884 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCF4P15884 PCDHB18P-201ENST00000524813 2368 ntBASIC19.17■□□□□ 0.66
TCF4P15884 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCF4P15884 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TCF4P15884 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCF4P15884 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCF4P15884 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.16■□□□□ 0.66
TCF4P15884 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCF4P15884 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCF4P15884 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCF4P15884 MIR149-201ENST00000384879 89 ntBASIC19.16■□□□□ 0.66
TCF4P15884 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCF4P15884 SEC1P-202ENST00000473944 940 ntBASIC19.16■□□□□ 0.66
TCF4P15884 AC128688.1-201ENST00000487626 519 ntBASIC19.16■□□□□ 0.66
TCF4P15884 AC104390.1-201ENST00000555663 520 ntBASIC19.16■□□□□ 0.66
TCF4P15884 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.16■□□□□ 0.66
TCF4P15884 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.16■□□□□ 0.66
TCF4P15884 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.16■□□□□ 0.66
TCF4P15884 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.16■□□□□ 0.66
TCF4P15884 AC024243.1-201ENST00000609234 778 ntBASIC19.16■□□□□ 0.66
TCF4P15884 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.16■□□□□ 0.66
TCF4P15884 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCF4P15884 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TCF4P15884 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCF4P15884 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.16■□□□□ 0.66
TCF4P15884 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.16■□□□□ 0.66
TCF4P15884 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TCF4P15884 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCF4P15884 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCF4P15884 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.16■□□□□ 0.66
TCF4P15884 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.16■□□□□ 0.66
TCF4P15884 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.16■□□□□ 0.66
TCF4P15884 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCF4P15884 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.16■□□□□ 0.66
TCF4P15884 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TCF4P15884 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TCF4P15884 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.15■□□□□ 0.66
TCF4P15884 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TCF4P15884 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.15■□□□□ 0.66
TCF4P15884 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
TCF4P15884 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.15■□□□□ 0.66
TCF4P15884 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.15■□□□□ 0.66
TCF4P15884 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.15■□□□□ 0.66
TCF4P15884 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.15■□□□□ 0.66
TCF4P15884 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.15■□□□□ 0.66
TCF4P15884 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.15■□□□□ 0.66
TCF4P15884 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.15■□□□□ 0.66
TCF4P15884 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 KRT8P7-201ENST00000533003 1432 ntBASIC19.15■□□□□ 0.66
TCF4P15884 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.15■□□□□ 0.66
TCF4P15884 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCF4P15884 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms