Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRAFP15056 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.92■□□□□ 0.62
BRAFP15056 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.92■□□□□ 0.62
BRAFP15056 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRAFP15056 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRAFP15056 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRAFP15056 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.92■□□□□ 0.62
BRAFP15056 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.92■□□□□ 0.62
BRAFP15056 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.92■□□□□ 0.62
BRAFP15056 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRAFP15056 MIR6786-201ENST00000616843 113 ntBASIC18.92■□□□□ 0.62
BRAFP15056 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
BRAFP15056 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.92■□□□□ 0.62
BRAFP15056 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.92■□□□□ 0.62
BRAFP15056 AC135776.1-201ENST00000319817 2481 ntBASIC18.92■□□□□ 0.62
BRAFP15056 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.92■□□□□ 0.62
BRAFP15056 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRAFP15056 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRAFP15056 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRAFP15056 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
BRAFP15056 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BRAFP15056 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.91■□□□□ 0.62
BRAFP15056 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRAFP15056 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.91■□□□□ 0.62
BRAFP15056 FSCN1P1-201ENST00000568912 1481 ntBASIC18.91■□□□□ 0.62
BRAFP15056 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BRAFP15056 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
BRAFP15056 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRAFP15056 AL499627.1-201ENST00000569373 2188 ntBASIC18.91■□□□□ 0.62
BRAFP15056 GNAS-203ENST00000306120 1878 ntBASIC18.91■□□□□ 0.62
BRAFP15056 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRAFP15056 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRAFP15056 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
BRAFP15056 TSPY21P-201ENST00000433481 731 ntBASIC18.91■□□□□ 0.62
BRAFP15056 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.91■□□□□ 0.62
BRAFP15056 Z85996.1-201ENST00000494644 937 ntBASIC18.91■□□□□ 0.62
BRAFP15056 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BRAFP15056 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.91■□□□□ 0.62
BRAFP15056 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.91■□□□□ 0.62
BRAFP15056 AP000525.1-201ENST00000608286 694 ntBASIC18.91■□□□□ 0.62
BRAFP15056 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BRAFP15056 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRAFP15056 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
BRAFP15056 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
BRAFP15056 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRAFP15056 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRAFP15056 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BRAFP15056 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRAFP15056 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.9■□□□□ 0.62
BRAFP15056 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRAFP15056 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRAFP15056 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.9■□□□□ 0.62
BRAFP15056 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.9■□□□□ 0.62
BRAFP15056 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRAFP15056 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRAFP15056 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.9■□□□□ 0.62
BRAFP15056 RCC2P6-201ENST00000526625 1557 ntBASIC18.9■□□□□ 0.62
BRAFP15056 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
BRAFP15056 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRAFP15056 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRAFP15056 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRAFP15056 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.9■□□□□ 0.62
BRAFP15056 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.9■□□□□ 0.62
BRAFP15056 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRAFP15056 UNC93B2-201ENST00000285383 730 ntBASIC18.9■□□□□ 0.62
BRAFP15056 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRAFP15056 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.9■□□□□ 0.62
BRAFP15056 AC087499.1-201ENST00000418141 1075 ntBASIC18.9■□□□□ 0.62
BRAFP15056 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.9■□□□□ 0.62
BRAFP15056 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRAFP15056 AC008040.2-201ENST00000461049 708 ntBASIC18.9■□□□□ 0.62
BRAFP15056 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
BRAFP15056 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRAFP15056 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.9■□□□□ 0.62
BRAFP15056 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.9■□□□□ 0.62
BRAFP15056 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BRAFP15056 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.9■□□□□ 0.62
BRAFP15056 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRAFP15056 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.9■□□□□ 0.62
BRAFP15056 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRAFP15056 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRAFP15056 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRAFP15056 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BRAFP15056 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BRAFP15056 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
BRAFP15056 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
BRAFP15056 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.89■□□□□ 0.61
BRAFP15056 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
BRAFP15056 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRAFP15056 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BRAFP15056 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRAFP15056 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.89■□□□□ 0.61
BRAFP15056 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.89■□□□□ 0.61
BRAFP15056 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
BRAFP15056 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.89■□□□□ 0.61
BRAFP15056 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
BRAFP15056 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.89■□□□□ 0.61
BRAFP15056 AC130371.2-201ENST00000619443 611 ntBASIC18.89■□□□□ 0.61
BRAFP15056 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.89■□□□□ 0.61
BRAFP15056 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms