Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL4P13236 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CCL4P13236 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL4P13236 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.32■□□□□ 0.36
CCL4P13236 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CCL4P13236 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL4P13236 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.32■□□□□ 0.36
CCL4P13236 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.32■□□□□ 0.36
CCL4P13236 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.32■□□□□ 0.36
CCL4P13236 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.32■□□□□ 0.36
CCL4P13236 AC113404.2-201ENST00000507884 177 ntBASIC17.32■□□□□ 0.36
CCL4P13236 RNA5SP419-201ENST00000515908 135 ntBASIC17.32■□□□□ 0.36
CCL4P13236 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.32■□□□□ 0.36
CCL4P13236 AP001005.1-201ENST00000571755 1248 ntBASIC17.32■□□□□ 0.36
CCL4P13236 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.32■□□□□ 0.36
CCL4P13236 AC064862.7-201ENST00000604520 867 ntBASIC17.32■□□□□ 0.36
CCL4P13236 AC114341.1-201ENST00000618070 349 ntBASIC17.32■□□□□ 0.36
CCL4P13236 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.32■□□□□ 0.36
CCL4P13236 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.32■□□□□ 0.36
CCL4P13236 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.32■□□□□ 0.36
CCL4P13236 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.32■□□□□ 0.36
CCL4P13236 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL4P13236 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL4P13236 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL4P13236 MYLKP1-201ENST00000509077 1580 ntBASIC17.32■□□□□ 0.36
CCL4P13236 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.32■□□□□ 0.36
CCL4P13236 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.31■□□□□ 0.36
CCL4P13236 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CCL4P13236 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.31■□□□□ 0.36
CCL4P13236 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.31■□□□□ 0.36
CCL4P13236 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCL4P13236 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL4P13236 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCL4P13236 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.31■□□□□ 0.36
CCL4P13236 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCL4P13236 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL4P13236 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL4P13236 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCL4P13236 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL4P13236 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL4P13236 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CCL4P13236 RCN1P2-201ENST00000398357 915 ntBASIC17.31■□□□□ 0.36
CCL4P13236 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.31■□□□□ 0.36
CCL4P13236 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CCL4P13236 AC068472.1-201ENST00000474589 881 ntBASIC17.31■□□□□ 0.36
CCL4P13236 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCL4P13236 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCL4P13236 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.31■□□□□ 0.36
CCL4P13236 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.31■□□□□ 0.36
CCL4P13236 AC005336.2-201ENST00000593183 939 ntBASIC17.31■□□□□ 0.36
CCL4P13236 AL671883.3-201ENST00000603274 991 ntBASIC17.31■□□□□ 0.36
CCL4P13236 AC148477.8-201ENST00000624298 468 ntBASIC17.31■□□□□ 0.36
CCL4P13236 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.31■□□□□ 0.36
CCL4P13236 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL4P13236 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL4P13236 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL4P13236 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL4P13236 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.31■□□□□ 0.36
CCL4P13236 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL4P13236 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL4P13236 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.31■□□□□ 0.36
CCL4P13236 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCL4P13236 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.3■□□□□ 0.36
CCL4P13236 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.3■□□□□ 0.36
CCL4P13236 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CCL4P13236 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL4P13236 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCL4P13236 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.3■□□□□ 0.36
CCL4P13236 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL4P13236 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL4P13236 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL4P13236 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL4P13236 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.3■□□□□ 0.36
CCL4P13236 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCL4P13236 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.3■□□□□ 0.36
CCL4P13236 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.3■□□□□ 0.36
CCL4P13236 AL773604.1-201ENST00000617417 272 ntBASIC17.3■□□□□ 0.36
CCL4P13236 AF228730.7-201ENST00000641842 219 ntBASIC17.3■□□□□ 0.36
CCL4P13236 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.3■□□□□ 0.36
CCL4P13236 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCL4P13236 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL4P13236 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.3■□□□□ 0.36
CCL4P13236 AL024508.2-201ENST00000607749 1894 ntBASIC17.3■□□□□ 0.36
CCL4P13236 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL4P13236 AL499627.1-201ENST00000569373 2188 ntBASIC17.3■□□□□ 0.36
CCL4P13236 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.3■□□□□ 0.36
CCL4P13236 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL4P13236 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.3■□□□□ 0.36
CCL4P13236 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL4P13236 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CCL4P13236 AC005332.7-201ENST00000614046 2005 ntBASIC17.3■□□□□ 0.36
CCL4P13236 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL4P13236 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.29■□□□□ 0.36
CCL4P13236 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL4P13236 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCL4P13236 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCL4P13236 IL9RP2-201ENST00000423948 1312 ntBASIC17.29■□□□□ 0.36
CCL4P13236 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL4P13236 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.29■□□□□ 0.36
CCL4P13236 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms