Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH1P12830 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH1P12830 AC090340.1-201ENST00000620778 4980 ntBASIC17.92■□□□□ 0.46
CDH1P12830 AC112777.1-201ENST00000540175 1423 ntBASIC17.92■□□□□ 0.46
CDH1P12830 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH1P12830 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH1P12830 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH1P12830 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH1P12830 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH1P12830 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH1P12830 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH1P12830 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CDH1P12830 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH1P12830 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CDH1P12830 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH1P12830 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH1P12830 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH1P12830 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH1P12830 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH1P12830 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.92■□□□□ 0.46
CDH1P12830 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH1P12830 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH1P12830 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH1P12830 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH1P12830 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
CDH1P12830 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH1P12830 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CDH1P12830 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH1P12830 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CDH1P12830 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH1P12830 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CDH1P12830 HCG11-201ENST00000411553 5696 ntBASIC17.91■□□□□ 0.46
CDH1P12830 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH1P12830 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH1P12830 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CDH1P12830 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH1P12830 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CDH1P12830 AC009947.2-201ENST00000444014 672 ntBASIC17.91■□□□□ 0.46
CDH1P12830 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH1P12830 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH1P12830 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH1P12830 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH1P12830 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH1P12830 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CDH1P12830 MYC-208ENST00000641036 567 ntBASIC17.91■□□□□ 0.46
CDH1P12830 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH1P12830 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH1P12830 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH1P12830 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH1P12830 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH1P12830 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH1P12830 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH1P12830 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH1P12830 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH1P12830 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDH1P12830 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.9■□□□□ 0.46
CDH1P12830 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH1P12830 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDH1P12830 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.9■□□□□ 0.46
CDH1P12830 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.9■□□□□ 0.46
CDH1P12830 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 KRT18P23-201ENST00000435622 1283 ntBASIC17.9■□□□□ 0.46
CDH1P12830 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.9■□□□□ 0.46
CDH1P12830 AL512604.3-201ENST00000569583 964 ntBASIC17.9■□□□□ 0.46
CDH1P12830 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.9■□□□□ 0.46
CDH1P12830 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CDH1P12830 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CDH1P12830 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.9■□□□□ 0.46
CDH1P12830 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH1P12830 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CDH1P12830 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH1P12830 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.89■□□□□ 0.46
CDH1P12830 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDH1P12830 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms