Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC172P0C7W6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC172P0C7W6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC172P0C7W6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 CRYGFP-201ENST00000418459 633 ntBASIC19.88■□□□□ 0.77
CCDC172P0C7W6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 MIR3180-5-201ENST00000583743 153 ntBASIC19.88■□□□□ 0.77
CCDC172P0C7W6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 REXO1L10P-201ENST00000615707 1290 ntBASIC19.88■□□□□ 0.77
CCDC172P0C7W6 REXO1L12P-201ENST00000622156 912 ntBASIC19.88■□□□□ 0.77
CCDC172P0C7W6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC172P0C7W6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 AP005242.2-201ENST00000580065 1175 ntBASIC19.87■□□□□ 0.77
CCDC172P0C7W6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 AC026471.5-201ENST00000615068 467 ntBASIC19.87■□□□□ 0.77
CCDC172P0C7W6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC172P0C7W6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 AC135776.1-201ENST00000319817 2481 ntBASIC19.86■□□□□ 0.77
CCDC172P0C7W6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC172P0C7W6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms