Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
HMGN1P05114 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN1P05114 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN1P05114 GMCL1P1-201ENST00000463439 1581 ntBASIC16.68■□□□□ 0.26
HMGN1P05114 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGN1P05114 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN1P05114 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HMGN1P05114 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN1P05114 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN1P05114 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN1P05114 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGN1P05114 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN1P05114 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGN1P05114 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HMGN1P05114 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
HMGN1P05114 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGN1P05114 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HMGN1P05114 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN1P05114 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN1P05114 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN1P05114 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HMGN1P05114 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN1P05114 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN1P05114 AL353807.1-201ENST00000427475 662 ntBASIC16.67■□□□□ 0.26
HMGN1P05114 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HMGN1P05114 RPS2P4-201ENST00000476944 856 ntBASIC16.67■□□□□ 0.26
HMGN1P05114 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.67■□□□□ 0.26
HMGN1P05114 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN1P05114 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.67■□□□□ 0.26
HMGN1P05114 AC026271.3-201ENST00000571884 352 ntBASIC16.67■□□□□ 0.26
HMGN1P05114 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.67■□□□□ 0.26
HMGN1P05114 AL031985.4-201ENST00000642138 673 ntBASIC16.67■□□□□ 0.26
HMGN1P05114 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN1P05114 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN1P05114 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN1P05114 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN1P05114 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HMGN1P05114 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN1P05114 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
HMGN1P05114 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HMGN1P05114 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGN1P05114 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN1P05114 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
HMGN1P05114 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN1P05114 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN1P05114 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
HMGN1P05114 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN1P05114 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.66■□□□□ 0.26
HMGN1P05114 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN1P05114 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN1P05114 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN1P05114 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN1P05114 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN1P05114 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN1P05114 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN1P05114 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
HMGN1P05114 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN1P05114 KRT16P1-201ENST00000399124 1418 ntBASIC16.66■□□□□ 0.26
HMGN1P05114 MIR935-201ENST00000401179 91 ntBASIC16.66■□□□□ 0.26
HMGN1P05114 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
HMGN1P05114 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HMGN1P05114 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN1P05114 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN1P05114 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HMGN1P05114 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.66■□□□□ 0.26
HMGN1P05114 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN1P05114 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN1P05114 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.66■□□□□ 0.26
HMGN1P05114 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.66■□□□□ 0.26
HMGN1P05114 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
HMGN1P05114 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
HMGN1P05114 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HMGN1P05114 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN1P05114 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN1P05114 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.66■□□□□ 0.26
HMGN1P05114 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN1P05114 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN1P05114 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN1P05114 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.66■□□□□ 0.26
HMGN1P05114 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.66■□□□□ 0.26
HMGN1P05114 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN1P05114 FZD10-202ENST00000539839 3282 ntBASIC16.65■□□□□ 0.26
HMGN1P05114 AC106820.2-201ENST00000563775 3264 ntBASIC16.65■□□□□ 0.26
HMGN1P05114 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.65■□□□□ 0.26
HMGN1P05114 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
HMGN1P05114 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.65■□□□□ 0.26
HMGN1P05114 MIR564-202ENST00000385049 94 ntBASIC16.65■□□□□ 0.26
HMGN1P05114 AL355802.2-201ENST00000402069 882 ntBASIC16.65■□□□□ 0.26
HMGN1P05114 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 FAM207BP-201ENST00000447172 505 ntBASIC16.65■□□□□ 0.26
HMGN1P05114 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms