Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
APPP05067 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
APPP05067 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
APPP05067 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC22.03■■□□□ 1.12
APPP05067 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
APPP05067 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
APPP05067 HBZP1-201ENST00000354915 429 ntBASIC22.03■■□□□ 1.12
APPP05067 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
APPP05067 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
APPP05067 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC22.03■■□□□ 1.12
APPP05067 TPM1-226ENST00000560959 925 ntTSL 2 BASIC22.03■■□□□ 1.12
APPP05067 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
APPP05067 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
APPP05067 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
APPP05067 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC22.03■■□□□ 1.12
APPP05067 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC22.03■■□□□ 1.12
APPP05067 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
APPP05067 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
APPP05067 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
APPP05067 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
APPP05067 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC22.03■■□□□ 1.12
APPP05067 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
APPP05067 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
APPP05067 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC22.03■■□□□ 1.12
APPP05067 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
APPP05067 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC22.02■■□□□ 1.12
APPP05067 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
APPP05067 AL391807.1-203ENST00000604392 2365 ntBASIC22.02■■□□□ 1.12
APPP05067 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC22.02■■□□□ 1.12
APPP05067 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
APPP05067 LY6E-213ENST00000522528 606 ntTSL 3 BASIC22.02■■□□□ 1.12
APPP05067 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC22.02■■□□□ 1.12
APPP05067 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC22.02■■□□□ 1.12
APPP05067 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC22.02■■□□□ 1.12
APPP05067 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC22.02■■□□□ 1.12
APPP05067 ZNF444P1-201ENST00000559497 298 ntBASIC22.02■■□□□ 1.12
APPP05067 AL136038.4-201ENST00000603606 1261 ntBASIC22.02■■□□□ 1.12
APPP05067 AC083849.1-201ENST00000615227 514 ntBASIC22.02■■□□□ 1.12
APPP05067 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC22.02■■□□□ 1.12
APPP05067 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
APPP05067 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22.02■■□□□ 1.12
APPP05067 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
APPP05067 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
APPP05067 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
APPP05067 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22.02■■□□□ 1.12
APPP05067 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
APPP05067 PBK-203ENST00000522944 1499 ntTSL 2 BASIC22.02■■□□□ 1.12
APPP05067 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
APPP05067 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
APPP05067 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC22.02■■□□□ 1.11
APPP05067 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
APPP05067 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
APPP05067 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC22.01■■□□□ 1.11
APPP05067 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
APPP05067 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
APPP05067 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
APPP05067 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
APPP05067 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC22.01■■□□□ 1.11
APPP05067 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC22.01■■□□□ 1.11
APPP05067 USP49-202ENST00000373010 2446 ntTSL 5 BASIC22.01■■□□□ 1.11
APPP05067 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
APPP05067 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
APPP05067 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
APPP05067 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
APPP05067 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
APPP05067 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
APPP05067 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
APPP05067 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
APPP05067 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC22.01■■□□□ 1.11
APPP05067 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
APPP05067 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
APPP05067 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
APPP05067 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC22■■□□□ 1.11
APPP05067 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
APPP05067 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC22■■□□□ 1.11
APPP05067 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC22■■□□□ 1.11
APPP05067 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
APPP05067 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC22■■□□□ 1.11
APPP05067 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC22■■□□□ 1.11
APPP05067 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC22■■□□□ 1.11
APPP05067 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
APPP05067 DAP-202ENST00000432074 1048 ntTSL 2 BASIC22■■□□□ 1.11
APPP05067 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC22■■□□□ 1.11
APPP05067 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC22■■□□□ 1.11
APPP05067 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC22■■□□□ 1.11
APPP05067 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC22■■□□□ 1.11
APPP05067 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC22■■□□□ 1.11
APPP05067 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
APPP05067 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
APPP05067 WIZP1-201ENST00000531444 2299 ntBASIC22■■□□□ 1.11
APPP05067 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
APPP05067 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC22■■□□□ 1.11
APPP05067 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
APPP05067 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
APPP05067 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.99■■□□□ 1.11
APPP05067 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
APPP05067 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
APPP05067 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.99■■□□□ 1.11
APPP05067 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
APPP05067 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms