Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC3O95833 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CLIC3O95833 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC3O95833 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CLIC3O95833 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.99■□□□□ 0.31
CLIC3O95833 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC3O95833 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.99■□□□□ 0.31
CLIC3O95833 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC3O95833 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.99■□□□□ 0.31
CLIC3O95833 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.99■□□□□ 0.31
CLIC3O95833 AC007322.1-201ENST00000426983 750 ntBASIC16.99■□□□□ 0.31
CLIC3O95833 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.99■□□□□ 0.31
CLIC3O95833 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.99■□□□□ 0.31
CLIC3O95833 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.99■□□□□ 0.31
CLIC3O95833 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CLIC3O95833 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.99■□□□□ 0.31
CLIC3O95833 LINC00602-201ENST00000629776 2065 ntBASIC16.99■□□□□ 0.31
CLIC3O95833 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC3O95833 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC3O95833 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CLIC3O95833 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC3O95833 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC3O95833 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.99■□□□□ 0.31
CLIC3O95833 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC3O95833 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC3O95833 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC3O95833 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
CLIC3O95833 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC3O95833 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.99■□□□□ 0.31
CLIC3O95833 AL023806.1-201ENST00000603994 1649 ntBASIC16.99■□□□□ 0.31
CLIC3O95833 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC3O95833 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC3O95833 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC3O95833 KRT8P32-201ENST00000512863 1461 ntBASIC16.99■□□□□ 0.31
CLIC3O95833 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC3O95833 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLIC3O95833 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLIC3O95833 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
CLIC3O95833 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
CLIC3O95833 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLIC3O95833 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLIC3O95833 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CLIC3O95833 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.98■□□□□ 0.31
CLIC3O95833 PKD1P1-201ENST00000458669 6805 ntBASIC16.98■□□□□ 0.31
CLIC3O95833 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLIC3O95833 AC016769.1-201ENST00000409132 1010 ntBASIC16.98■□□□□ 0.31
CLIC3O95833 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.98■□□□□ 0.31
CLIC3O95833 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLIC3O95833 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.98■□□□□ 0.31
CLIC3O95833 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLIC3O95833 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.98■□□□□ 0.31
CLIC3O95833 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.98■□□□□ 0.31
CLIC3O95833 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
CLIC3O95833 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.98■□□□□ 0.31
CLIC3O95833 AC231657.2-201ENST00000624556 255 ntBASIC16.98■□□□□ 0.31
CLIC3O95833 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLIC3O95833 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.98■□□□□ 0.31
CLIC3O95833 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLIC3O95833 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.98■□□□□ 0.31
CLIC3O95833 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLIC3O95833 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
CLIC3O95833 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.98■□□□□ 0.31
CLIC3O95833 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CLIC3O95833 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.98■□□□□ 0.31
CLIC3O95833 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
CLIC3O95833 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLIC3O95833 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.98■□□□□ 0.31
CLIC3O95833 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CLIC3O95833 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CLIC3O95833 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC3O95833 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.97■□□□□ 0.31
CLIC3O95833 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CLIC3O95833 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC3O95833 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC3O95833 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CLIC3O95833 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.97■□□□□ 0.31
CLIC3O95833 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC3O95833 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC3O95833 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC3O95833 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CLIC3O95833 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC3O95833 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC3O95833 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CLIC3O95833 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC3O95833 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CLIC3O95833 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.97■□□□□ 0.31
CLIC3O95833 AL160286.2-201ENST00000567150 934 ntBASIC16.97■□□□□ 0.31
CLIC3O95833 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.97■□□□□ 0.31
CLIC3O95833 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC3O95833 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC3O95833 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC3O95833 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.97■□□□□ 0.31
CLIC3O95833 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC3O95833 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC3O95833 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC3O95833 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC3O95833 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CLIC3O95833 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CLIC3O95833 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC3O95833 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms