Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC008764.7-201ENST00000593779 1081 ntBASIC16.04■□□□□ 0.16
UPK1BO75841 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.04■□□□□ 0.16
UPK1BO75841 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.04■□□□□ 0.16
UPK1BO75841 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.04■□□□□ 0.16
UPK1BO75841 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.04■□□□□ 0.16
UPK1BO75841 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UPK1BO75841 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UPK1BO75841 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UPK1BO75841 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UPK1BO75841 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
UPK1BO75841 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
UPK1BO75841 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UPK1BO75841 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.04■□□□□ 0.16
UPK1BO75841 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UPK1BO75841 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.04■□□□□ 0.16
UPK1BO75841 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
UPK1BO75841 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
UPK1BO75841 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UPK1BO75841 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UPK1BO75841 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.03■□□□□ 0.16
UPK1BO75841 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
UPK1BO75841 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
UPK1BO75841 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.03■□□□□ 0.16
UPK1BO75841 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
UPK1BO75841 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UPK1BO75841 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UPK1BO75841 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
UPK1BO75841 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UPK1BO75841 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
UPK1BO75841 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
UPK1BO75841 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
UPK1BO75841 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.03■□□□□ 0.16
UPK1BO75841 AC099791.1-201ENST00000416440 715 ntBASIC16.03■□□□□ 0.16
UPK1BO75841 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.03■□□□□ 0.16
UPK1BO75841 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UPK1BO75841 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.03■□□□□ 0.16
UPK1BO75841 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
UPK1BO75841 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UPK1BO75841 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UPK1BO75841 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UPK1BO75841 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
UPK1BO75841 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
UPK1BO75841 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
UPK1BO75841 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UPK1BO75841 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
UPK1BO75841 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UPK1BO75841 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UPK1BO75841 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.02■□□□□ 0.16
UPK1BO75841 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UPK1BO75841 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UPK1BO75841 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.02■□□□□ 0.16
UPK1BO75841 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
UPK1BO75841 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UPK1BO75841 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UPK1BO75841 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UPK1BO75841 MCRIP2P1-201ENST00000394346 511 ntBASIC16.02■□□□□ 0.16
UPK1BO75841 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.02■□□□□ 0.16
UPK1BO75841 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UPK1BO75841 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.02■□□□□ 0.16
UPK1BO75841 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UPK1BO75841 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UPK1BO75841 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.02■□□□□ 0.16
UPK1BO75841 AC068587.9-201ENST00000641814 219 ntBASIC16.02■□□□□ 0.16
UPK1BO75841 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UPK1BO75841 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
UPK1BO75841 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
UPK1BO75841 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UPK1BO75841 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UPK1BO75841 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
UPK1BO75841 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.02■□□□□ 0.15
UPK1BO75841 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
UPK1BO75841 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UPK1BO75841 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
UPK1BO75841 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.02■□□□□ 0.15
UPK1BO75841 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
UPK1BO75841 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
UPK1BO75841 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
UPK1BO75841 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.01■□□□□ 0.15
UPK1BO75841 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 RCC2P6-201ENST00000526625 1557 ntBASIC16.01■□□□□ 0.15
UPK1BO75841 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.01■□□□□ 0.15
UPK1BO75841 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.01■□□□□ 0.15
UPK1BO75841 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.01■□□□□ 0.15
UPK1BO75841 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
UPK1BO75841 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms