Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX4O60224 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SSX4O60224 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.69■□□□□ 0.26
SSX4O60224 AC135776.1-201ENST00000319817 2481 ntBASIC16.69■□□□□ 0.26
SSX4O60224 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSX4O60224 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SSX4O60224 AC018695.7-201ENST00000624587 2492 ntBASIC16.69■□□□□ 0.26
SSX4O60224 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX4O60224 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.69■□□□□ 0.26
SSX4O60224 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX4O60224 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX4O60224 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.69■□□□□ 0.26
SSX4O60224 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.69■□□□□ 0.26
SSX4O60224 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.69■□□□□ 0.26
SSX4O60224 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.69■□□□□ 0.26
SSX4O60224 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.69■□□□□ 0.26
SSX4O60224 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
SSX4O60224 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.69■□□□□ 0.26
SSX4O60224 AP006587.1-201ENST00000534129 1502 ntBASIC16.69■□□□□ 0.26
SSX4O60224 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSX4O60224 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSX4O60224 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SSX4O60224 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSX4O60224 AC134043.2-201ENST00000624206 2238 ntBASIC16.69■□□□□ 0.26
SSX4O60224 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX4O60224 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX4O60224 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SSX4O60224 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSX4O60224 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSX4O60224 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX4O60224 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX4O60224 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.68■□□□□ 0.26
SSX4O60224 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.68■□□□□ 0.26
SSX4O60224 LINC01568-207ENST00000641790 1380 ntBASIC16.68■□□□□ 0.26
SSX4O60224 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX4O60224 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.68■□□□□ 0.26
SSX4O60224 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.68■□□□□ 0.26
SSX4O60224 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX4O60224 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX4O60224 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.68■□□□□ 0.26
SSX4O60224 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX4O60224 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.68■□□□□ 0.26
SSX4O60224 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.68■□□□□ 0.26
SSX4O60224 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.68■□□□□ 0.26
SSX4O60224 AL390955.1-201ENST00000428694 934 ntBASIC16.68■□□□□ 0.26
SSX4O60224 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.68■□□□□ 0.26
SSX4O60224 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SSX4O60224 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.68■□□□□ 0.26
SSX4O60224 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.68■□□□□ 0.26
SSX4O60224 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.68■□□□□ 0.26
SSX4O60224 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.68■□□□□ 0.26
SSX4O60224 NAPSB-206ENST00000562112 1266 ntBASIC16.68■□□□□ 0.26
SSX4O60224 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.68■□□□□ 0.26
SSX4O60224 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.68■□□□□ 0.26
SSX4O60224 AC145285.6-201ENST00000604632 637 ntBASIC16.68■□□□□ 0.26
SSX4O60224 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.68■□□□□ 0.26
SSX4O60224 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX4O60224 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.68■□□□□ 0.26
SSX4O60224 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX4O60224 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX4O60224 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX4O60224 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SSX4O60224 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX4O60224 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
SSX4O60224 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX4O60224 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSX4O60224 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX4O60224 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.67■□□□□ 0.26
SSX4O60224 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.67■□□□□ 0.26
SSX4O60224 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX4O60224 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
SSX4O60224 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSX4O60224 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.67■□□□□ 0.26
SSX4O60224 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSX4O60224 SIRPAP1-201ENST00000448467 1770 ntBASIC16.67■□□□□ 0.26
SSX4O60224 AC046158.3-201ENST00000624947 2558 ntBASIC16.67■□□□□ 0.26
SSX4O60224 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SSX4O60224 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSX4O60224 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX4O60224 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.67■□□□□ 0.26
SSX4O60224 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSX4O60224 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.67■□□□□ 0.26
SSX4O60224 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSX4O60224 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SSX4O60224 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX4O60224 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX4O60224 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX4O60224 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX4O60224 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX4O60224 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX4O60224 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SSX4O60224 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX4O60224 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX4O60224 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX4O60224 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.67■□□□□ 0.26
SSX4O60224 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX4O60224 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.66■□□□□ 0.26
SSX4O60224 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSX4O60224 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX4O60224 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms