Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PROM1O43490 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PROM1O43490 AC113347.1-201ENST00000413321 391 ntBASIC17.46■□□□□ 0.39
PROM1O43490 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PROM1O43490 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
PROM1O43490 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.46■□□□□ 0.39
PROM1O43490 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.46■□□□□ 0.39
PROM1O43490 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PROM1O43490 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PROM1O43490 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PROM1O43490 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
PROM1O43490 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.46■□□□□ 0.39
PROM1O43490 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PROM1O43490 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PROM1O43490 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PROM1O43490 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.46■□□□□ 0.39
PROM1O43490 AC005332.8-201ENST00000622750 2735 ntBASIC17.46■□□□□ 0.39
PROM1O43490 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PROM1O43490 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PROM1O43490 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
PROM1O43490 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
PROM1O43490 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.46■□□□□ 0.38
PROM1O43490 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
PROM1O43490 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.45■□□□□ 0.38
PROM1O43490 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.45■□□□□ 0.38
PROM1O43490 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PROM1O43490 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PROM1O43490 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PROM1O43490 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PROM1O43490 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PROM1O43490 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.45■□□□□ 0.38
PROM1O43490 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.45■□□□□ 0.38
PROM1O43490 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PROM1O43490 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PROM1O43490 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.45■□□□□ 0.38
PROM1O43490 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PROM1O43490 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.45■□□□□ 0.38
PROM1O43490 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PROM1O43490 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PROM1O43490 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PROM1O43490 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PROM1O43490 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PROM1O43490 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.45■□□□□ 0.38
PROM1O43490 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
PROM1O43490 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.45■□□□□ 0.38
PROM1O43490 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.45■□□□□ 0.38
PROM1O43490 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.45■□□□□ 0.38
PROM1O43490 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PROM1O43490 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.45■□□□□ 0.38
PROM1O43490 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PROM1O43490 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PROM1O43490 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PROM1O43490 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PROM1O43490 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
PROM1O43490 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.45■□□□□ 0.38
PROM1O43490 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.45■□□□□ 0.38
PROM1O43490 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PROM1O43490 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.45■□□□□ 0.38
PROM1O43490 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PROM1O43490 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PROM1O43490 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
PROM1O43490 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.45■□□□□ 0.38
PROM1O43490 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PROM1O43490 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PROM1O43490 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PROM1O43490 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PROM1O43490 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PROM1O43490 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.44■□□□□ 0.38
PROM1O43490 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.44■□□□□ 0.38
PROM1O43490 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PROM1O43490 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PROM1O43490 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PROM1O43490 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.44■□□□□ 0.38
PROM1O43490 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PROM1O43490 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.44■□□□□ 0.38
PROM1O43490 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.44■□□□□ 0.38
PROM1O43490 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PROM1O43490 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.44■□□□□ 0.38
PROM1O43490 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PROM1O43490 TERF1P1-201ENST00000311003 1181 ntBASIC17.44■□□□□ 0.38
PROM1O43490 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PROM1O43490 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.44■□□□□ 0.38
PROM1O43490 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.44■□□□□ 0.38
PROM1O43490 AP000523.1-201ENST00000398242 1049 ntBASIC17.44■□□□□ 0.38
PROM1O43490 TMPOP1-202ENST00000424642 1267 ntBASIC17.44■□□□□ 0.38
PROM1O43490 AL137013.1-201ENST00000432946 1228 ntBASIC17.44■□□□□ 0.38
PROM1O43490 ATP5G1P1-201ENST00000448724 379 ntBASIC17.44■□□□□ 0.38
PROM1O43490 SEC1P-202ENST00000473944 940 ntBASIC17.44■□□□□ 0.38
PROM1O43490 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.44■□□□□ 0.38
PROM1O43490 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.44■□□□□ 0.38
PROM1O43490 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.44■□□□□ 0.38
PROM1O43490 MIR3180-4-201ENST00000582223 153 ntBASIC17.44■□□□□ 0.38
PROM1O43490 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PROM1O43490 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.44■□□□□ 0.38
PROM1O43490 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PROM1O43490 AC024243.1-201ENST00000609234 778 ntBASIC17.44■□□□□ 0.38
PROM1O43490 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PROM1O43490 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.44■□□□□ 0.38
PROM1O43490 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.44■□□□□ 0.38
PROM1O43490 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms