Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AC010331.1-201ENST00000611423 582 ntBASIC17.32■□□□□ 0.36
CLDN4O14493 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CLDN4O14493 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN4O14493 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CLDN4O14493 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN4O14493 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN4O14493 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CLDN4O14493 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN4O14493 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN4O14493 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN4O14493 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CLDN4O14493 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN4O14493 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN4O14493 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN4O14493 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN4O14493 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN4O14493 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN4O14493 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN4O14493 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN4O14493 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN4O14493 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN4O14493 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.31■□□□□ 0.36
CLDN4O14493 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN4O14493 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN4O14493 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN4O14493 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.31■□□□□ 0.36
CLDN4O14493 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CLDN4O14493 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN4O14493 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN4O14493 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.31■□□□□ 0.36
CLDN4O14493 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN4O14493 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN4O14493 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN4O14493 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN4O14493 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN4O14493 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN4O14493 WIZP1-201ENST00000531444 2299 ntBASIC17.31■□□□□ 0.36
CLDN4O14493 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN4O14493 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLDN4O14493 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CLDN4O14493 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN4O14493 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN4O14493 AC073592.3-201ENST00000625118 1834 ntBASIC17.31■□□□□ 0.36
CLDN4O14493 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
CLDN4O14493 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN4O14493 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
CLDN4O14493 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN4O14493 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN4O14493 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CLDN4O14493 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN4O14493 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN4O14493 PVRIG2P-201ENST00000435460 978 ntBASIC17.3■□□□□ 0.36
CLDN4O14493 AC112907.2-201ENST00000448639 330 ntBASIC17.3■□□□□ 0.36
CLDN4O14493 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN4O14493 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN4O14493 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CLDN4O14493 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN4O14493 NTF6B-201ENST00000591913 560 ntBASIC17.3■□□□□ 0.36
CLDN4O14493 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.3■□□□□ 0.36
CLDN4O14493 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN4O14493 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLDN4O14493 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN4O14493 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CLDN4O14493 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN4O14493 AC126763.1-201ENST00000552015 2118 ntBASIC17.3■□□□□ 0.36
CLDN4O14493 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN4O14493 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN4O14493 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN4O14493 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN4O14493 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN4O14493 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLDN4O14493 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN4O14493 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN4O14493 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN4O14493 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN4O14493 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLDN4O14493 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLDN4O14493 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLDN4O14493 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN4O14493 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN4O14493 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN4O14493 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
CLDN4O14493 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN4O14493 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN4O14493 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN4O14493 SPDYE15P-201ENST00000424157 909 ntBASIC17.29■□□□□ 0.36
CLDN4O14493 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.29■□□□□ 0.36
CLDN4O14493 AC008687.5-201ENST00000593746 558 ntBASIC17.29■□□□□ 0.36
CLDN4O14493 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.29■□□□□ 0.36
CLDN4O14493 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN4O14493 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.29■□□□□ 0.36
CLDN4O14493 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN4O14493 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CLDN4O14493 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN4O14493 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN4O14493 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN4O14493 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN4O14493 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN4O14493 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLDN4O14493 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms